RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ELMOD1Q8N336 334 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 DEPTORQ8TB45 409 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 CSGALNACT1Q8TDX6 532 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 RSPRY1Q96DX4 576 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 ZNF512Q96ME7 567 aaPredicted RBP18.26■□□□□ 0.51
HERC1-207ENST00000560316 KIFC3Q9BVG8 833 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 FBXL5Q9UKA1 691 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 TRIP11Q15643 1979 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 SMIM28A0A1B0GU29 152 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 WNT7AO00755 349 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 FOXD2O60548 495 aaPredicted RBP18.25■□□□□ 0.51
HERC1-207ENST00000560316 PAPSS2O95340 614 aaPredicted RBP18.25■□□□□ 0.51
HERC1-207ENST00000560316 SPATA31C1P0DKV0 1188 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 XRCC6P12956 609 aaKnown RBP eCLIP18.25■□□□□ 0.51
HERC1-207ENST00000560316 SHC2P98077 582 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 SCRN1Q12765 414 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 TWF1Q12792 350 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 NT5DC1Q5TFE4 455 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 TXNDC11Q6PKC3 985 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 GPIHBP1Q8IV16 184 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 TTC8Q8TAM2 541 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 ARRDC1-AS1Q9H2J1 176 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 SLITRK6Q9H5Y7 841 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 TRPV4Q9HBA0 871 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 POLD4Q9HCU8 107 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 CYP46A1Q9Y6A2 500 aa18.25■□□□□ 0.51
HERC1-207ENST00000560316 PODXLO00592 558 aa18.24■□□□□ 0.51
HERC1-207ENST00000560316 TM4SF5O14894 197 aa18.24■□□□□ 0.51
HERC1-207ENST00000560316 KPNA1P52294 538 aaPredicted RBP18.24■□□□□ 0.51
HERC1-207ENST00000560316 LIMK1P53667 647 aa18.24■□□□□ 0.51
HERC1-207ENST00000560316 ATF7IP2Q5U623 682 aa18.24■□□□□ 0.51
HERC1-207ENST00000560316 YAF2Q8IY57 180 aa18.24■□□□□ 0.51
HERC1-207ENST00000560316 C12orf50Q8NA57 414 aaPredicted RBP18.24■□□□□ 0.51
HERC1-207ENST00000560316 TNFRSF25Q93038 417 aa18.24■□□□□ 0.51
HERC1-207ENST00000560316 ASAH2Q9NR71 780 aa18.24■□□□□ 0.51
HERC1-207ENST00000560316 CEP295Q9C0D2 2601 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 ATRXP46100 2492 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 H7C4K7 107 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 MED24O75448 989 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 CDKL5O76039 1030 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 NAMPTP43490 491 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 MLLT6P55198 1093 aaPredicted RBP18.23■□□□□ 0.51
HERC1-207ENST00000560316 OSTNP61366 133 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 COL9A2Q14055 689 aaPredicted RBP18.23■□□□□ 0.51
HERC1-207ENST00000560316 MRPL58Q14197 206 aaKnown RBP18.23■□□□□ 0.51
HERC1-207ENST00000560316 CTXN3Q4LDR2 81 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 TPGS2Q68CL5 300 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 WDR5BQ86VZ2 330 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 CATSPER3Q86XQ3 398 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 CEP120Q8N960 986 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 SHKBP1Q8TBC3 707 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 STK36Q9NRP7 1315 aa18.23■□□□□ 0.51
HERC1-207ENST00000560316 PDCD11Q14690 1871 aaKnown RBP18.22■□□□□ 0.51
HERC1-207ENST00000560316 FAM208BQ5VWN6 2430 aa18.22■□□□□ 0.51
HERC1-207ENST00000560316 SPECC1L-ADORA2AF8WAN1 911 aa18.22■□□□□ 0.51
HERC1-207ENST00000560316 SYN3O14994 580 aa18.22■□□□□ 0.51
HERC1-207ENST00000560316 CHADO15335 359 aa18.22■□□□□ 0.51
HERC1-207ENST00000560316 NEMFO60524 1076 aa18.22■□□□□ 0.51
HERC1-207ENST00000560316 KRT2P35908 639 aa18.22■□□□□ 0.51
HERC1-207ENST00000560316 EPHA5P54756 1037 aa18.22■□□□□ 0.51
HERC1-207ENST00000560316 DGKKQ5KSL6 1271 aa18.22■□□□□ 0.51
HERC1-207ENST00000560316 STPG1Q5TH74 334 aa18.22■□□□□ 0.51
HERC1-207ENST00000560316 PADI6Q6TGC4 694 aa18.22■□□□□ 0.51
HERC1-207ENST00000560316 MSANTD3Q96H12 275 aa18.22■□□□□ 0.51
HERC1-207ENST00000560316 ZMAT2Q96NC0 199 aaKnown RBP18.22■□□□□ 0.51
HERC1-207ENST00000560316 MTMR9Q96QG7 549 aa18.22■□□□□ 0.51
HERC1-207ENST00000560316 SMOC1Q9H4F8 434 aa18.22■□□□□ 0.51
HERC1-207ENST00000560316 C8orf33Q9H7E9 229 aaPredicted RBP18.22■□□□□ 0.51
HERC1-207ENST00000560316 AFF4Q9UHB7 1163 aaKnown RBP18.22■□□□□ 0.51
HERC1-207ENST00000560316 GREB1Q4ZG55 1949 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 MYBPHLA2RUH7 354 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 ZNF806P0C7X5 589 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 CYP11B2P19099 503 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 CTHP32929 405 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 PXNP49023 591 aaPredicted RBP18.21■□□□□ 0.51
HERC1-207ENST00000560316 YARSP54577 528 aaKnown RBP18.21■□□□□ 0.51
HERC1-207ENST00000560316 PON2Q15165 354 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 XKR4Q5GH76 650 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 STXBP5Q5T5C0 1151 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 C1orf228Q6PIY5 440 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 ALKAL1Q6UXT8 129 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 RNF19BQ6ZMZ0 732 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 LEMD2Q8NC56 503 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 E2F7Q96AV8 911 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 ZFYVE19Q96K21 471 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 TUFT1Q9NNX1 390 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 SH2B1Q9NRF2 756 aaPredicted RBP18.21■□□□□ 0.51
HERC1-207ENST00000560316 NUB1Q9Y5A7 615 aa18.21■□□□□ 0.51
HERC1-207ENST00000560316 A0A1W2PRU2 124 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 KCNK5O95279 499 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 PROS1P07225 676 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 HOXA6P31267 233 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 GRM5P41594 1212 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 FCHO2Q0JRZ9 810 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 ZNF280DQ6N043 979 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 KBTBD6Q86V97 674 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 FAM200AQ8TCP9 573 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 C18orf25Q96B23 403 aaPredicted RBP18.2■□□□□ 0.5
HERC1-207ENST00000560316 LRRC3BQ96PB8 259 aa18.2■□□□□ 0.5
HERC1-207ENST00000560316 NACC1Q96RE7 527 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms