RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 ADPGKQ9BRR6 497 aa7.15□□□□□ -1.26
IRF9-208ENST00000560311 HERC2P3Q9BVR0 1158 aa7.15□□□□□ -1.26
IRF9-208ENST00000560311 KMT5AQ9NQR1 393 aa7.15□□□□□ -1.26
IRF9-208ENST00000560311 KCND2Q9NZV8 630 aa7.15□□□□□ -1.26
IRF9-208ENST00000560311 KLK14Q9P0G3 267 aa7.15□□□□□ -1.26
IRF9-208ENST00000560311 CLEC1BQ9P126 229 aa7.15□□□□□ -1.26
IRF9-208ENST00000560311 ARHGAP28Q9P2N2 729 aa7.15□□□□□ -1.26
IRF9-208ENST00000560311 KANSL3Q9P2N6 904 aa7.15□□□□□ -1.26
IRF9-208ENST00000560311 PARP2Q9UGN5 583 aa7.15□□□□□ -1.26
IRF9-208ENST00000560311 FBXO2Q9UK22 296 aaPredicted RBP7.15□□□□□ -1.26
IRF9-208ENST00000560311 FAM50BQ9Y247 325 aa7.15□□□□□ -1.26
IRF9-208ENST00000560311 USP20Q9Y2K6 914 aa7.15□□□□□ -1.26
IRF9-208ENST00000560311 CLIC4Q9Y696 253 aa7.15□□□□□ -1.26
IRF9-208ENST00000560311 NPHP3-ACAD11A0A0J9YXS1 232 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 A0A1B0GTH6 734 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 F8W810 466 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 NRP1O14786 923 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 SLC16A4O15374 487 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 MBTPS2O43462 519 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 BNIP3LO60238 219 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 URODP06132 367 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 CTSAP10619 480 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 PLS3P13797 630 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 MARCKSP29966 332 aaPredicted RBP7.14□□□□□ -1.27
IRF9-208ENST00000560311 UBA7P41226 1012 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 OR1G1P47890 313 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 CEBPZQ03701 1054 aaKnown RBP7.14□□□□□ -1.27
IRF9-208ENST00000560311 COASYQ13057 564 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 PTPAQ15257 358 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 SMAD2Q15796 467 aaKnown RBP7.14□□□□□ -1.27
IRF9-208ENST00000560311 NKAPLQ5M9Q1 402 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 NT5DC1Q5TFE4 455 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 CHSY3Q70JA7 882 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 APBB1IPQ7Z5R6 666 aaPredicted RBP7.14□□□□□ -1.27
IRF9-208ENST00000560311 GPBP1Q86WP2 473 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 FAM178BQ8IXR5 827 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 COLGALT2Q8IYK4 626 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 SYT2Q8N9I0 419 aaPredicted RBP7.14□□□□□ -1.27
IRF9-208ENST00000560311 GSTCDQ8NEC7 633 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 RAD54LQ92698 747 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 REEP2Q9BRK0 252 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 MRPL4Q9BYD3 311 aaKnown RBP7.14□□□□□ -1.27
IRF9-208ENST00000560311 CDT1Q9H211 546 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 C17orf75Q9HAS0 396 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 BLOC1S4Q9NUP1 217 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 SNTG2Q9NY99 539 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 ANKFY1Q9P2R3 1169 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 STK39Q9UEW8 545 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 USP15Q9Y4E8 981 aaPredicted RBP7.14□□□□□ -1.27
IRF9-208ENST00000560311 HCFC2Q9Y5Z7 792 aa7.14□□□□□ -1.27
IRF9-208ENST00000560311 CASTOR2A6NHX0 329 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 K7ENM7 598 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 PTGESO14684 152 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 CLASP2O75122 1294 aaKnown RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 TBCAO75347 108 aaKnown RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 KIF4AO95239 1232 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 SOD2P04179 222 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 KRT18P05783 430 aaKnown RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 HSP90AA1P07900 732 aaKnown RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 MAPTP10636 758 aaKnown RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 HARSP12081 509 aaKnown RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 PROZP22891 400 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 TXLNAP40222 546 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 NASPP49321 788 aaPredicted RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 GLUD2P49448 558 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 NCKAP1LP55160 1127 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 KCNC3Q14003 757 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 GIT2Q14161 759 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 MCM6Q14566 821 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 HSP90AA2PQ14568 343 aaPredicted RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 BMS1Q14692 1282 aaKnown RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 NOLC1Q14978 699 aaKnown RBP eCLIP7.13□□□□□ -1.27
IRF9-208ENST00000560311 GLRA4Q5JXX5 417 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 SPECC1Q5M775 1068 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 ANKRD54Q6NXT1 300 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 MPZL3Q6UWV2 235 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 ADHFE1Q8IWW8 467 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 RNF168Q8IYW5 571 aaPredicted RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 GJD3Q8N144 294 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 PGBD3Q8N328 593 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 CEP120Q8N960 986 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 MRPL43Q8N983 215 aaKnown RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 TMEM161BQ8NDZ6 487 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 LARP4BQ92615 738 aaKnown RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 CASP10Q92851 521 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 CLIC6Q96NY7 704 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 USP28Q96RU2 1077 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 POP1Q99575 1024 aaKnown RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 ACO2Q99798 780 aaKnown RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 CXCL16Q9H2A7 254 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 ZSCAN16Q9H4T2 348 aaPredicted RBP7.13□□□□□ -1.27
IRF9-208ENST00000560311 CD320Q9NPF0 282 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 NDFIP2Q9NV92 336 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 DZANK1Q9NVP4 752 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 MIOSQ9NXC5 875 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 CACNG4Q9UBN1 327 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 PRKAG3Q9UGI9 489 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 ODF2LQ9ULJ1 636 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 TNFSF13BQ9Y275 285 aa7.13□□□□□ -1.27
IRF9-208ENST00000560311 FAN1Q9Y2M0 1017 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms