RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 FBXW11Q9UKB1 542 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 DOCK8Q8NF50 2099 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 A0A1B0GVL5 298 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 I3L4J1 428 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 KIAA0391O15091 583 aaKnown RBP14.35□□□□□ -0.11
SMAD3-213ENST00000560175 KLRC4O43908 158 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 GPR37L1O60883 481 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 PRPF6O94906 941 aaKnown RBP14.35□□□□□ -0.11
SMAD3-213ENST00000560175 ABLIM3O94929 683 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 MYL1P05976 194 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 POU2F2P09086 479 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 ALADP13716 330 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 PFKFB1P16118 471 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 SSTR3P32745 418 aaPredicted RBP14.35□□□□□ -0.11
SMAD3-213ENST00000560175 SNRPFP62306 86 aaKnown RBP14.35□□□□□ -0.11
SMAD3-213ENST00000560175 NUCB2P80303 420 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 SPAG1Q07617 926 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 CUL4BQ13620 913 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 UVSSAQ2YD98 709 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 JADE1Q6IE81 842 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 ELMSAN1Q6PJG2 1045 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 TMC5Q6UXY8 1006 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 KREMEN2Q8NCW0 462 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 HPS3Q969F9 1004 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 C1QTNF1Q9BXJ1 281 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 C11orf16Q9NQ32 467 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 SERTAD1Q9UHV2 236 aa14.35□□□□□ -0.11
SMAD3-213ENST00000560175 NOTCH4Q99466 2003 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 CCDC195A0A1B0GUA6 201 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 TGFB1I1O43294 461 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 ZMYND10O75800 440 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 OAZ2O95190 189 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 IL18RAPO95256 599 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 HOXA9P31269 272 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 OR1D2P34982 312 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 LILRA4P59901 499 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 ASIC1P78348 528 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 BMT2Q1RMZ1 405 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 FAM26FQ5R3K3 315 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 VARS2Q5ST30 1063 aaKnown RBP14.34□□□□□ -0.11
SMAD3-213ENST00000560175 STXBP4Q6ZWJ1 553 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 ZDHHC14Q8IZN3 488 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 TMEM130Q8N3G9 435 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 ZSWIM2Q8NEG5 633 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 ZNF461Q8TAF7 563 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 TMEM174Q8WUU8 243 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 SCFD1Q8WVM8 642 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 PAGE5Q96GU1 130 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 CBWD1Q9BRT8 395 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 PRKD2Q9BZL6 878 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 WDR6Q9NNW5 1121 aaKnown RBP14.34□□□□□ -0.11
SMAD3-213ENST00000560175 PCDHB8Q9UN66 801 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 NR2E1Q9Y466 385 aa14.34□□□□□ -0.11
SMAD3-213ENST00000560175 DCXO43602 365 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 EXTL3O43909 919 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 RFPL2O75678 378 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 NFICP08651 508 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 HNRNPA1P09651 372 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMAD3-213ENST00000560175 WEE2P0C1S8 567 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 SPATA31D3P0C874 917 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 CASP1P29466 404 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 WNT7BP56706 349 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 TMEM132DQ14C87 1099 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 C9orf57Q5W0N0 161 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 SPATA31D4Q6ZUB0 917 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 BRSK2Q8IWQ3 736 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 EFCAB13Q8IY85 973 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 CEP57L1Q8IYX8 460 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 SYCP3Q8IZU3 236 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 BEST2Q8NFU1 509 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 CXorf38Q8TB03 319 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 BORCS6Q96GS4 357 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 RPGRIP1Q96KN7 1286 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 OXCT2Q9BYC2 517 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-213ENST00000560175 BLZF1Q9H2G9 400 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 NUB1Q9Y5A7 615 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 CDY1Q9Y6F8 540 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 UBE4BO95155 1302 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 TECTAO75443 2155 aa14.33□□□□□ -0.12
SMAD3-213ENST00000560175 H7C4K7 107 aa14.32□□□□□ -0.12
SMAD3-213ENST00000560175 PPEF2O14830 753 aa14.32□□□□□ -0.12
SMAD3-213ENST00000560175 TYMPP19971 482 aa14.32□□□□□ -0.12
SMAD3-213ENST00000560175 SYKP43405 635 aa14.32□□□□□ -0.12
SMAD3-213ENST00000560175 AFMP43652 599 aa14.32□□□□□ -0.12
SMAD3-213ENST00000560175 GUCY2FP51841 1108 aa14.32□□□□□ -0.12
SMAD3-213ENST00000560175 NDUFA8P51970 172 aa14.32□□□□□ -0.12
SMAD3-213ENST00000560175 PSMD2Q13200 908 aa14.32□□□□□ -0.12
SMAD3-213ENST00000560175 GLYCTKQ8IVS8 523 aa14.32□□□□□ -0.12
SMAD3-213ENST00000560175 C12orf56Q8IXR9 622 aa14.32□□□□□ -0.12
SMAD3-213ENST00000560175 APPL2Q8NEU8 664 aa14.32□□□□□ -0.12
SMAD3-213ENST00000560175 FAM213AQ9BRX8 229 aa14.32□□□□□ -0.12
SMAD3-213ENST00000560175 CGNQ9P2M7 1197 aaKnown RBP14.32□□□□□ -0.12
SMAD3-213ENST00000560175 MAFFQ9ULX9 164 aa14.32□□□□□ -0.12
SMAD3-213ENST00000560175 ARHGEF37A1IGU5 675 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 WDR27A2RRH5 827 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 C2CD4DB7Z1M9 353 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 SPTLC1O15269 473 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 CYP11A1P05108 521 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 ATF2P15336 505 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 MCM4P33991 863 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms