RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 RNASELQ05823 741 aaKnown RBP12.33□□□□□ -0.44
RORA-212ENST00000560004 PRPF38BQ5VTL8 546 aaKnown RBP12.33□□□□□ -0.44
RORA-212ENST00000560004 KRT39Q6A163 491 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 USP37Q86T82 979 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 CREBRFQ8IUR6 639 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 COLGALT1Q8NBJ5 622 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 LMO3Q8TAP4 145 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 ELMO3Q96BJ8 720 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 TMEM175Q9BSA9 504 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 ZBED2Q9BTP6 218 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 XYLT2Q9H1B5 865 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 VPS16Q9H269 839 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 NDST4Q9H3R1 872 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
RORA-212ENST00000560004 COQ4Q9Y3A0 265 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 A0A1B0GTH6 734 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 FSD2A1L4K1 749 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 TULP1O00294 542 aaPredicted RBP12.32□□□□□ -0.44
RORA-212ENST00000560004 NRP1O14786 923 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 STX10O60499 249 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 EFEMP2O95967 443 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 HLA-DRAP01903 254 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 PIK3CAP42336 1068 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 OR1G1P47890 313 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 AARSP49588 968 aaKnown RBP eCLIP12.32□□□□□ -0.44
RORA-212ENST00000560004 MYL6P60660 151 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 TPM4P67936 248 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 BIRC3Q13489 604 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 NCOA4Q13772 614 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 DPY19L2P1Q6NXN4 242 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 SLC39A11Q8N1S5 342 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 FIBCD1Q8N539 461 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 CACTINQ8WUQ7 758 aaKnown RBP12.32□□□□□ -0.44
RORA-212ENST00000560004 UROC1Q96N76 676 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 NAP1L5Q96NT1 182 aaPredicted RBP12.32□□□□□ -0.44
RORA-212ENST00000560004 VN1R3Q9BXE9 311 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 APOBEC3GQ9HC16 384 aaKnown RBP12.32□□□□□ -0.44
RORA-212ENST00000560004 AGAP1Q9UPQ3 857 aa12.32□□□□□ -0.44
RORA-212ENST00000560004 PRG3Q9Y2Y8 225 aaPredicted RBP12.32□□□□□ -0.44
RORA-212ENST00000560004 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.32□□□□□ -0.44
RORA-212ENST00000560004 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.31□□□□□ -0.44
RORA-212ENST00000560004 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.31□□□□□ -0.44
RORA-212ENST00000560004 A0A1W2PPC1 479 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 GTPBP10A4D1E9 387 aaKnown RBP12.31□□□□□ -0.44
RORA-212ENST00000560004 NT5C1B-RDH14C9J2C7 533 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 P4HA2O15460 535 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 TEX33O43247 280 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 N4BP1O75113 896 aaKnown RBP12.31□□□□□ -0.44
RORA-212ENST00000560004 STAU1O95793 577 aaKnown RBP12.31□□□□□ -0.44
RORA-212ENST00000560004 ASS1P00966 412 aaKnown RBP12.31□□□□□ -0.44
RORA-212ENST00000560004 LAG3P18627 525 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 CDK11BP21127 795 aaKnown RBP12.31□□□□□ -0.44
RORA-212ENST00000560004 RPL9P32969 192 aaKnown RBP12.31□□□□□ -0.44
RORA-212ENST00000560004 KLK7P49862 253 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 KCNMA1Q12791 1236 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 SPOPLQ6IQ16 392 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 SARM1Q6SZW1 724 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 KCNT2Q6UVM3 1135 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 RNF168Q8IYW5 571 aaPredicted RBP12.31□□□□□ -0.44
RORA-212ENST00000560004 LRRC52Q8N7C0 313 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 FBXL13Q8NEE6 735 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 HASPINQ8TF76 798 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 FAM193BQ96PV7 902 aaPredicted RBP12.31□□□□□ -0.44
RORA-212ENST00000560004 C17orf80Q9BSJ5 609 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 PI4K2AQ9BTU6 479 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 NKX2-4Q9H2Z4 354 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 VRTNQ9H8Y1 702 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
RORA-212ENST00000560004 GCNT4Q9P109 453 aa12.31□□□□□ -0.44
RORA-212ENST00000560004 KRT19P08727 400 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 DNAJB2P25686 324 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 PBX1P40424 430 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 BRCC3P46736 316 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 NOP14P78316 857 aaKnown RBP12.3□□□□□ -0.44
RORA-212ENST00000560004 RBP5P82980 135 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 SMAD3P84022 425 aaKnown RBP12.3□□□□□ -0.44
RORA-212ENST00000560004 APBA1Q02410 837 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 TAP1Q03518 808 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 PTPN21Q16825 1174 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 LRIT3Q3SXY7 679 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
RORA-212ENST00000560004 ZNF560Q96MR9 790 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 ZNF558Q96NG5 402 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 CRACR2AQ9BSW2 395 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 INTS2Q9H0H0 1204 aaKnown RBP12.3□□□□□ -0.44
RORA-212ENST00000560004 SIX2Q9NPC8 291 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.3□□□□□ -0.44
RORA-212ENST00000560004 RAB20Q9NX57 234 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 IFNKQ9P0W0 207 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 AJAP1Q9UKB5 411 aaPredicted RBP12.3□□□□□ -0.44
RORA-212ENST00000560004 SIK3Q9Y2K2 1263 aa12.3□□□□□ -0.44
RORA-212ENST00000560004 C5orf67F2Z3F1 127 aa12.29□□□□□ -0.44
RORA-212ENST00000560004 PHACTR2O75167 634 aa12.29□□□□□ -0.44
RORA-212ENST00000560004 B3GAT3O94766 335 aa12.29□□□□□ -0.44
RORA-212ENST00000560004 SERPINC1P01008 464 aa12.29□□□□□ -0.44
RORA-212ENST00000560004 SLC9A1P19634 815 aa12.29□□□□□ -0.44
RORA-212ENST00000560004 CTNNB1P35222 781 aa12.29□□□□□ -0.44
RORA-212ENST00000560004 TAF6P49848 677 aa12.29□□□□□ -0.44
RORA-212ENST00000560004 LILRA4P59901 499 aa12.29□□□□□ -0.44
RORA-212ENST00000560004 NR1I3Q14994 352 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms