RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 AJAP1Q9UKB5 411 aaPredicted RBP10.13□□□□□ -0.79
HERC1-206ENST00000559996 SCN1AP35498 2009 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 SPTLC1O15269 473 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 EFCAB14O75071 495 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 HLA-DRAP01903 254 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 THP07101 528 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 PBX2P40425 430 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 MXI1P50539 228 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 AP3M2P53677 418 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 MYL6P60660 151 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 HTRA4P83105 476 aaPredicted RBP10.12□□□□□ -0.79
HERC1-206ENST00000559996 TFAMQ00059 246 aaKnown RBP10.12□□□□□ -0.79
HERC1-206ENST00000559996 UBXN1Q04323 297 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 HSP90AA2PQ14568 343 aaPredicted RBP10.12□□□□□ -0.79
HERC1-206ENST00000559996 SYCP1Q15431 976 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 SHHQ15465 462 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 NOMO2Q5JPE7 1267 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 C9orf57Q5W0N0 161 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 LIMS2Q7Z4I7 341 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 VSTM4Q8IW00 320 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 RNF169Q8NCN4 708 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 C3orf58Q8NDZ4 430 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 FBXL13Q8NEE6 735 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 CACTINQ8WUQ7 758 aaKnown RBP10.12□□□□□ -0.79
HERC1-206ENST00000559996 PI4K2AQ9BTU6 479 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 NAA15Q9BXJ9 866 aaKnown RBP10.12□□□□□ -0.79
HERC1-206ENST00000559996 GANQ9H2C0 597 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 NRDE2Q9H7Z3 1164 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 TBC1D13Q9NVG8 400 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 RAB20Q9NX57 234 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 DPP3Q9NY33 737 aa10.12□□□□□ -0.79
HERC1-206ENST00000559996 UBQLN1Q9UMX0 589 aaKnown RBP10.12□□□□□ -0.79
HERC1-206ENST00000559996 TDRD15B5MCY1 1934 aaKnown RBP10.11□□□□□ -0.79
HERC1-206ENST00000559996 F8W810 466 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 STX10O60499 249 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 UPP2O95045 317 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 EFEMP2O95967 443 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 ASS1P00966 412 aaKnown RBP10.11□□□□□ -0.79
HERC1-206ENST00000559996 ITGB3P05106 788 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 IBSPP21815 317 aaPredicted RBP10.11□□□□□ -0.79
HERC1-206ENST00000559996 CLCNKBP51801 687 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 PLCB2Q00722 1185 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 MYL7Q01449 175 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 GRIK3Q13003 919 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 UPP1Q16831 310 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 EXOC3L4Q17RC7 722 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 FILIP1LQ4L180 1135 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 KLHDC7AQ5VTJ3 777 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 SPOPLQ6IQ16 392 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 GJB7Q6PEY0 223 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 PSRC1Q6PGN9 363 aaPredicted RBP10.11□□□□□ -0.79
HERC1-206ENST00000559996 TRIM65Q6PJ69 517 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 GBP6Q6ZN66 633 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 ARHGEF19Q8IW93 802 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 HACE1Q8IYU2 909 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 ANKRD20A12PQ8NF67 263 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 RABGGTAQ92696 567 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 ANKRD36BP1Q96IX9 119 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 PDLIM2Q96JY6 352 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 GPR88Q9GZN0 384 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 VRTNQ9H8Y1 702 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 PLCB1Q9NQ66 1216 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 DNAJB4Q9UDY4 337 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 AGAP1Q9UPQ3 857 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 NUB1Q9Y5A7 615 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 NR2E3Q9Y5X4 410 aa10.11□□□□□ -0.79
HERC1-206ENST00000559996 TNRC18O15417 2968 aaPredicted RBP10.1□□□□□ -0.79
HERC1-206ENST00000559996 H0YGN5 161 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 CBFA2T2O43439 604 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 N4BP1O75113 896 aaKnown RBP10.1□□□□□ -0.79
HERC1-206ENST00000559996 GJB5O95377 273 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 STAU1O95793 577 aaKnown RBP10.1□□□□□ -0.79
HERC1-206ENST00000559996 AMHP03971 560 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 ITGB1P05556 798 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 TMEM191BP0C7N4 346 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 CDC25BP30305 580 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 POLR2BP30876 1174 aaKnown RBP10.1□□□□□ -0.79
HERC1-206ENST00000559996 AARSP49588 968 aaKnown RBP eCLIP10.1□□□□□ -0.79
HERC1-206ENST00000559996 RBP5P82980 135 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 TUSC3Q13454 348 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 NCOA4Q13772 614 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 FAM109BQ6ICB4 259 aaPredicted RBP10.1□□□□□ -0.79
HERC1-206ENST00000559996 GLB1LQ6UWU2 654 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 USP37Q86T82 979 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 UBR7Q8N806 425 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 BEST2Q8NFU1 509 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 PHOSPHO2Q8TCD6 241 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 BAP1Q92560 729 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 KAT5Q92993 513 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 KREMEN1Q96MU8 473 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 INTS2Q9H0H0 1204 aaKnown RBP10.1□□□□□ -0.79
HERC1-206ENST00000559996 PRO3102Q9H379 93 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 GCNT4Q9P109 453 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 KANSL3Q9P2N6 904 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 ITGA11Q9UKX5 1188 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 LRFN2Q9ULH4 789 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 INPP5FQ9Y2H2 1132 aa10.1□□□□□ -0.79
HERC1-206ENST00000559996 ITIH6Q6UXX5 1313 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 CASTOR2A6NHX0 329 aa10.09□□□□□ -0.79
HERC1-206ENST00000559996 TBKBP1A7MCY6 615 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms