RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 ACKR2O00590 384 aa17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 MEFVO15553 781 aaPredicted RBP17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 MICAL2O94851 1124 aa17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 CTDNEP1O95476 244 aa17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 PPP2R5DQ14738 602 aa17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 TEAD2Q15562 447 aa17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 CALCRLQ16602 461 aa17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 MAPK6Q16659 721 aa17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 LONP2Q86WA8 852 aa17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 GPIHBP1Q8IV16 184 aa17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 SPEM1Q8N4L4 309 aa17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 TTC8Q8TAM2 541 aa17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 ZMAT2Q96NC0 199 aaKnown RBP17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 FBXL5Q9UKA1 691 aa17.16■□□□□ 0.34
AC243562.3-201ENST00000559866 HEPACAM2A8MVW5 462 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 PAPSS2O95340 614 aaPredicted RBP17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 VNN2O95498 520 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 MYL4P12829 197 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 ATP2B1P20020 1258 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 TWF1Q12792 350 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 MRPL58Q14197 206 aaKnown RBP17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 STXBP5Q5T5C0 1151 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 PKN3Q6P5Z2 889 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 CATSPER3Q86XQ3 398 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 SHKBP1Q8TBC3 707 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 DEPDC1BQ8WUY9 529 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 UROC1Q96N76 676 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 LRRC3BQ96PB8 259 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 MTMR9Q96QG7 549 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 ADPGKQ9BRR6 497 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 TMEM60Q9H2L4 133 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 SMOC1Q9H4F8 434 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 ORC3Q9UBD5 711 aaPredicted RBP17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 ANK1P16157 1881 aa17.15■□□□□ 0.34
AC243562.3-201ENST00000559866 ZZEF1O43149 2961 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 MYO16Q9Y6X6 1858 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 PODXLO00592 558 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 ZNF263O14978 683 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 PFKFB2O60825 505 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 ELF1P32519 619 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 EPHA5P54756 1037 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 ANKRD1Q15327 319 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 MFSD6LQ8IWD5 586 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 MCPH1Q8NEM0 835 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 ZFYVE19Q96K21 471 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 LRRC3Q9BY71 257 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 C2orf40Q9H1Z8 148 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 ARRDC1-AS1Q9H2J1 176 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 CRISPLD1Q9H336 500 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 TRPV4Q9HBA0 871 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 BAHCC1Q9P281 2608 aa17.14■□□□□ 0.33
AC243562.3-201ENST00000559866 ZNF197O14709 1029 aa17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 AXIN1O15169 862 aa17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 FDPSP14324 419 aaKnown RBP17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 NAMPTP43490 491 aa17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 PXNP49023 591 aaPredicted RBP17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 OSTNP61366 133 aa17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 SHC2P98077 582 aa17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 COL9A2Q14055 689 aaPredicted RBP17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 DCAF4L1Q3SXM0 396 aa17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 AASDHQ4L235 1098 aaPredicted RBP17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 XKR4Q5GH76 650 aa17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 ATF7IP2Q5U623 682 aa17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 ALKAL1Q6UXT8 129 aa17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 RNF19BQ6ZMZ0 732 aa17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 TMC8Q8IU68 726 aa17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 C18orf25Q96B23 403 aaPredicted RBP17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 MKNK1Q9BUB5 465 aa17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 CDT1Q9H211 546 aa17.13■□□□□ 0.33
AC243562.3-201ENST00000559866 OBSL1O75147 1896 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 SPAG17Q6Q759 2223 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 TRAPPC3O43617 180 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 NEMFO60524 1076 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 XRCC6P12956 609 aaKnown RBP eCLIP17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 CTHP32929 405 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 CNR2P34972 360 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 LIMK1P53667 647 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 TRIM29Q14134 588 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 CYP4A22Q5TCH4 519 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 IL31Q6EBC2 164 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 PADI6Q6TGC4 694 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 CEP68Q76N32 757 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 DEPTORQ8TB45 409 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 DNAJC25Q9H1X3 360 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 GTSE1Q9NYZ3 720 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 TPCN1Q9ULQ1 816 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 YIPF1Q9Y548 306 aa17.12■□□□□ 0.33
AC243562.3-201ENST00000559866 A0A1W2PRU2 124 aa17.11■□□□□ 0.33
AC243562.3-201ENST00000559866 SPECC1L-ADORA2AF8WAN1 911 aa17.11■□□□□ 0.33
AC243562.3-201ENST00000559866 EXTL3O43909 919 aa17.11■□□□□ 0.33
AC243562.3-201ENST00000559866 OR4Q2P0C623 313 aa17.11■□□□□ 0.33
AC243562.3-201ENST00000559866 CYP11B2P19099 503 aa17.11■□□□□ 0.33
AC243562.3-201ENST00000559866 GRM5P41594 1212 aa17.11■□□□□ 0.33
AC243562.3-201ENST00000559866 FCHO2Q0JRZ9 810 aa17.11■□□□□ 0.33
AC243562.3-201ENST00000559866 PON2Q15165 354 aa17.11■□□□□ 0.33
AC243562.3-201ENST00000559866 CTXN3Q4LDR2 81 aa17.11■□□□□ 0.33
AC243562.3-201ENST00000559866 WDR5BQ86VZ2 330 aa17.11■□□□□ 0.33
AC243562.3-201ENST00000559866 CSGALNACT1Q8TDX6 532 aa17.11■□□□□ 0.33
AC243562.3-201ENST00000559866 ASAH2Q9NR71 780 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms