RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 GPR62Q9BZJ7 368 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 CSRNP2Q9H175 543 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 NXF3Q9H4D5 531 aaKnown RBP6.45□□□□□ -1.38
USP3-215ENST00000559771 ZSWIM4Q9H7M6 989 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 KCNK12Q9HB15 430 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 MAN1C1Q9NR34 630 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 DUSP12Q9UNI6 340 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 FAN1Q9Y2M0 1017 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 PRG3Q9Y2Y8 225 aaPredicted RBP6.45□□□□□ -1.38
USP3-215ENST00000559771 ZNF292O60281 2723 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 NOTCH4Q99466 2003 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 A0A1B0GUA9 196 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 CARNS1A5YM72 827 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 BTBD18B2RXH4 712 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 ASAP2O43150 1006 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 GAS2O43903 313 aaKnown RBP6.44□□□□□ -1.38
USP3-215ENST00000559771 SPATA31D3P0C874 917 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 ITGA4P13612 1032 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 RPL17P18621 184 aaKnown RBP6.44□□□□□ -1.38
USP3-215ENST00000559771 AOC1P19801 751 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 AKAP5P24588 427 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 AXLP30530 894 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 GLUD2P49448 558 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 RARRES1P49788 294 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 AK2P54819 239 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 TDGQ13569 410 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 BMS1Q14692 1282 aaKnown RBP6.44□□□□□ -1.38
USP3-215ENST00000559771 NAB2Q15742 525 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 SPATA31D4Q6ZUB0 917 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 CCDC149Q6ZUS6 474 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 TPH2Q8IWU9 490 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 NECAB1Q8N987 351 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 CNNM3Q8NE01 707 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 URGCPQ8TCY9 931 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 TCP11Q8WWU5 503 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 RABGGTAQ92696 567 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 SNX27Q96L92 541 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 EMILIN2Q9BXX0 1053 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 NFKBIZQ9BYH8 718 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 SLKQ9H2G2 1235 aaPredicted RBP6.44□□□□□ -1.38
USP3-215ENST00000559771 TMEM60Q9H2L4 133 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 WDR6Q9NNW5 1121 aaKnown RBP6.44□□□□□ -1.38
USP3-215ENST00000559771 GPRC5CQ9NQ84 441 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 AVENQ9NQS1 362 aaPredicted RBP6.44□□□□□ -1.38
USP3-215ENST00000559771 MRPL17Q9NRX2 175 aaKnown RBP6.44□□□□□ -1.38
USP3-215ENST00000559771 KANSL3Q9P2N6 904 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 EPS15L1Q9UBC2 864 aa6.44□□□□□ -1.38
USP3-215ENST00000559771 ORC3Q9UBD5 711 aaPredicted RBP6.44□□□□□ -1.38
USP3-215ENST00000559771 MYH15Q9Y2K3 1946 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 CCDC195A0A1B0GUA6 201 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 INO80B-WBP1J3KQ70 363 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 PTGESO14684 152 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 ADAM12O43184 909 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 TGM5O43548 720 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 JAK2O60674 1132 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 DKC1O60832 514 aaKnown RBP eCLIP6.43□□□□□ -1.38
USP3-215ENST00000559771 MED24O75448 989 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 ERLIN2O94905 339 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 URODP06132 367 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 OR1G1P47890 313 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 PCBP4P57723 403 aaKnown RBP6.43□□□□□ -1.38
USP3-215ENST00000559771 NRG1Q02297 640 aaPredicted RBP6.43□□□□□ -1.38
USP3-215ENST00000559771 PTK2Q05397 1052 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 MXD4Q14582 209 aaPredicted RBP6.43□□□□□ -1.38
USP3-215ENST00000559771 PCBP1Q15365 356 aaKnown RBP eCLIP6.43□□□□□ -1.38
USP3-215ENST00000559771 RTP2Q5QGT7 225 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 CDCA2Q69YH5 1023 aaPredicted RBP6.43□□□□□ -1.38
USP3-215ENST00000559771 FUT10Q6P4F1 479 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 NOTUMQ6P988 496 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 CPLX2Q6PUV4 134 aaKnown RBP6.43□□□□□ -1.38
USP3-215ENST00000559771 PRSS55Q6UWB4 352 aaPredicted RBP6.43□□□□□ -1.38
USP3-215ENST00000559771 CD300LGQ6UXG3 332 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 OTUD6AQ7L8S5 288 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 OTOP3Q7RTS5 596 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 FRMD5Q7Z6J6 570 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 PALB2Q86YC2 1186 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 PARP9Q8IXQ6 854 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 EXOC8Q8IYI6 725 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 CCDC105Q8IYK2 499 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 SLFN12Q8IYM2 578 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 SIX5Q8N196 739 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 SLC44A3Q8N4M1 653 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 NSUN7Q8NE18 718 aaKnown RBP6.43□□□□□ -1.38
USP3-215ENST00000559771 ST13P5Q8NFI4 369 aaPredicted RBP6.43□□□□□ -1.38
USP3-215ENST00000559771 PIGOQ8TEQ8 1089 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 BSNDQ8WZ55 320 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 GTF3C6Q969F1 213 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 ACSF2Q96CM8 615 aaPredicted RBP6.43□□□□□ -1.38
USP3-215ENST00000559771 CCDC51Q96ER9 411 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 FAM193BQ96PV7 902 aaPredicted RBP6.43□□□□□ -1.38
USP3-215ENST00000559771 RPP25Q9BUL9 199 aaKnown RBP6.43□□□□□ -1.38
USP3-215ENST00000559771 APOL6Q9BWW8 343 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 NT5C3AQ9H0P0 336 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 FZD8Q9H461 694 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 TTC12Q9H892 705 aaPredicted RBP6.43□□□□□ -1.38
USP3-215ENST00000559771 UBN1Q9NPG3 1134 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 ANKEF1Q9NU02 776 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 KLK14Q9P0G3 267 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 DLGAP2Q9P1A6 1054 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 FNIP2Q9P278 1114 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms