RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 UBXN6Q9BZV1 441 aa6.41□□□□□ -1.38
USP3-212ENST00000559276 MFSD1Q9H3U5 465 aa6.41□□□□□ -1.38
USP3-212ENST00000559276 GOLPH3LQ9H4A5 285 aa6.41□□□□□ -1.38
USP3-212ENST00000559276 PLEKHA4Q9H4M7 779 aa6.41□□□□□ -1.38
USP3-212ENST00000559276 POLD4Q9HCU8 107 aa6.41□□□□□ -1.38
USP3-212ENST00000559276 ZDHHC7Q9NXF8 308 aa6.41□□□□□ -1.38
USP3-212ENST00000559276 SNTG2Q9NY99 539 aa6.41□□□□□ -1.38
USP3-212ENST00000559276 CWC15Q9P013 229 aaKnown RBP6.41□□□□□ -1.38
USP3-212ENST00000559276 PARP2Q9UGN5 583 aa6.41□□□□□ -1.38
USP3-212ENST00000559276 FBXW11Q9UKB1 542 aa6.41□□□□□ -1.38
USP3-212ENST00000559276 SSX2IPQ9Y2D8 614 aa6.41□□□□□ -1.38
USP3-212ENST00000559276 FHOD1Q9Y613 1164 aa6.41□□□□□ -1.38
USP3-212ENST00000559276 NUMBLQ9Y6R0 609 aa6.41□□□□□ -1.38
USP3-212ENST00000559276 COL4A2P08572 1712 aa6.41□□□□□ -1.38
USP3-212ENST00000559276 CCDC151A5D8V7 595 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 CASTOR2A6NHX0 329 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 NRG2O14511 850 aaPredicted RBP6.4□□□□□ -1.38
USP3-212ENST00000559276 SPTLC2O15270 562 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 MARCH6O60337 910 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 STX10O60499 249 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 LRRN2O75325 713 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 RECQL4O94761 1208 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 SMC2O95347 1197 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 XBP1P17861 261 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 GBP2P32456 591 aaPredicted RBP6.4□□□□□ -1.38
USP3-212ENST00000559276 CLCN6P51797 869 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 SOX4Q06945 474 aaPredicted RBP6.4□□□□□ -1.38
USP3-212ENST00000559276 BRD3Q15059 726 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 ARHGAP29Q52LW3 1261 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 NT5DC1Q5TFE4 455 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 ARMCX5Q6P1M9 558 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 PARM1Q6UWI2 310 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 GRASPQ7Z6J2 395 aaPredicted RBP6.4□□□□□ -1.38
USP3-212ENST00000559276 NOSTRINQ8IVI9 506 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 TRIML1Q8N9V2 468 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 FBXO18Q8NFZ0 1043 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 ITFG1Q8TB96 612 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 HNRNPLLQ8WVV9 542 aaKnown RBP6.4□□□□□ -1.38
USP3-212ENST00000559276 PIK3R5Q8WYR1 880 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 WASF1Q92558 559 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 NKD2Q969F2 451 aaPredicted RBP6.4□□□□□ -1.38
USP3-212ENST00000559276 CCDC34Q96HJ3 373 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 RTP3Q9BQQ7 232 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 TTPALQ9BTX7 342 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 POLR3CQ9BUI4 534 aaPredicted RBP6.4□□□□□ -1.38
USP3-212ENST00000559276 KIFC3Q9BVG8 833 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 NAA15Q9BXJ9 866 aaKnown RBP6.4□□□□□ -1.38
USP3-212ENST00000559276 XPO4Q9C0E2 1151 aaKnown RBP6.4□□□□□ -1.38
USP3-212ENST00000559276 TBC1D17Q9HA65 648 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 TUFT1Q9NNX1 390 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 SLC2A4RGQ9NR83 387 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.4□□□□□ -1.38
USP3-212ENST00000559276 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.4□□□□□ -1.38
USP3-212ENST00000559276 PRMT7Q9NVM4 692 aaPredicted RBP6.4□□□□□ -1.38
USP3-212ENST00000559276 ZNF446Q9NWS9 450 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 HCFC1R1Q9NWW0 138 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 CA14Q9ULX7 337 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 PCDHA7Q9UN72 937 aa6.4□□□□□ -1.38
USP3-212ENST00000559276 GVINP1Q7Z2Y8 2422 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 PDCD11Q14690 1871 aaKnown RBP6.39□□□□□ -1.39
USP3-212ENST00000559276 MIA3Q5JRA6 1907 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 LRRIQ4A6NIV6 560 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 ACKR2O00590 384 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 ABLIM1O14639 778 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 TADA2AO75478 443 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 ZNF202O95125 648 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 DCNP07585 359 aaKnown RBP6.39□□□□□ -1.39
USP3-212ENST00000559276 CYP11B2P19099 503 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 ATP2B1P20020 1258 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 FGFR3P22607 806 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 RPA1P27694 616 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 MCM7P33993 719 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 CLCNKBP51801 687 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 NDUFA8P51970 172 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 STARD6P59095 220 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 GPC5P78333 572 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 FANCCQ00597 558 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 GUCY1B3Q02153 619 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 RAB33AQ14088 237 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 NCAPHQ15003 741 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 SLC39A14Q15043 492 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 PSMD5Q16401 504 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 DPCR1Q3MIW9 517 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 XKR4Q5GH76 650 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 FAM171A1Q5VUB5 890 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 PHLDB3Q6NSJ2 640 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 PADI6Q6TGC4 694 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 SYT10Q6XYQ8 523 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 GET4Q7L5D6 327 aaPredicted RBP6.39□□□□□ -1.39
USP3-212ENST00000559276 TAS1R3Q7RTX0 852 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 TMC6Q7Z403 805 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 VSTM4Q8IW00 320 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 DAW1Q8N136 415 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 ADSSL1Q8N142 457 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 TMEM130Q8N3G9 435 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 CEP120Q8N960 986 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 MCPH1Q8NEM0 835 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 STAMQ92783 540 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 FGF13Q92913 245 aa6.39□□□□□ -1.39
USP3-212ENST00000559276 NXPE3Q969Y0 559 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms