RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 MCM4P33991 863 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 NBL1P41271 181 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 CDR1P51861 262 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 NUBP1P53384 320 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 WNT7BP56706 349 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 ANGPT1Q15389 498 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 PABPC1LQ4VXU2 614 aaKnown RBP14.78□□□□□ -0.04
VPS18-203ENST00000558855 PRSS36Q5K4E3 855 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 SCARA3Q6AZY7 606 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 PDXDC1Q6P996 788 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 RNF19BQ6ZMZ0 732 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 APBB1IPQ7Z5R6 666 aaPredicted RBP14.78□□□□□ -0.04
VPS18-203ENST00000558855 TTC9BQ8N6N2 239 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 ZNF461Q8TAF7 563 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 KCNN1Q92952 543 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 MCRS1Q96EZ8 462 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 AK8Q96MA6 479 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 CLIC6Q96NY7 704 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 TMEM209Q96SK2 561 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 FGFBP2Q9BYJ0 223 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 ARHGEF3Q9NR81 526 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 SLC38A7Q9NVC3 462 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 FBXO2Q9UK22 296 aaPredicted RBP14.78□□□□□ -0.04
VPS18-203ENST00000558855 ODF2LQ9ULJ1 636 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 MTF2Q9Y483 593 aaPredicted RBP14.78□□□□□ -0.04
VPS18-203ENST00000558855 INSL5Q9Y5Q6 135 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 CACNA1IQ9P0X4 2223 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 NUP210Q8TEM1 1887 aaPredicted RBP14.78□□□□□ -0.04
VPS18-203ENST00000558855 FRYLO94915 3013 aa14.77□□□□□ -0.04
VPS18-203ENST00000558855 A0A087X0B3 334 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 PRR23AA6NEV1 266 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 SYN3O14994 580 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 SPTLC1O15269 473 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 XYLBO75191 536 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 NFICP08651 508 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 GJA1P17302 382 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 MARCKSP29966 332 aaPredicted RBP14.77□□□□□ -0.05
VPS18-203ENST00000558855 LRPAP1P30533 357 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 MCM2P49736 904 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 CTXN3Q4LDR2 81 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 MYCT1Q8N699 235 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 ZSWIM2Q8NEG5 633 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 NXPE3Q969Y0 559 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 KIF12Q96FN5 646 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 BICD1Q96G01 975 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 FAM84AQ96KN4 292 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 KCND2Q9NZV8 630 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 CEP72Q9P209 647 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.77□□□□□ -0.05
VPS18-203ENST00000558855 NUB1Q9Y5A7 615 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 WDR87Q6ZQQ6 2873 aa14.77□□□□□ -0.05
VPS18-203ENST00000558855 A0A0B4J269 797 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 M0QZQ0 153 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 TRAPPC3O43617 180 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 FAM13AO94988 1023 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 ADRB2P07550 413 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 CLTAP09496 248 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 ATF2P15336 505 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 CD72P21854 359 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 RPL9P32969 192 aaKnown RBP14.76□□□□□ -0.05
VPS18-203ENST00000558855 LONP1P36776 959 aaKnown RBP14.76□□□□□ -0.05
VPS18-203ENST00000558855 UBA7P41226 1012 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 MATR3P43243 847 aaKnown RBP eCLIP14.76□□□□□ -0.05
VPS18-203ENST00000558855 AARSP49588 968 aaKnown RBP eCLIP14.76□□□□□ -0.05
VPS18-203ENST00000558855 LIG4P49917 911 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 SMTNP53814 917 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 KCNA1Q09470 495 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 SNW1Q13573 536 aaKnown RBP14.76□□□□□ -0.05
VPS18-203ENST00000558855 UVSSAQ2YD98 709 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 JADE1Q6IE81 842 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 BRAPQ7Z569 592 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 TCEAL8Q8IYN2 117 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 LARP4BQ92615 738 aaKnown RBP14.76□□□□□ -0.05
VPS18-203ENST00000558855 CORO1BQ9BR76 489 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 ZHX3Q9H4I2 956 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 CYP4F11Q9HBI6 524 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 LARSQ9P2J5 1176 aaKnown RBP14.76□□□□□ -0.05
VPS18-203ENST00000558855 PCDHB8Q9UN66 801 aa14.76□□□□□ -0.05
VPS18-203ENST00000558855 DCHS1Q96JQ0 3298 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 STK25O00506 426 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 HNRNPDLO14979 420 aaKnown RBP14.75□□□□□ -0.05
VPS18-203ENST00000558855 OGTO15294 1046 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 TRAK2O60296 914 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 ADCY1Q08828 1119 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 TANGO2Q6ICL3 276 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 DYMQ7RTS9 669 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 SFR1Q86XK3 245 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 MAP4K3Q8IVH8 894 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 MAML2Q8IZL2 1156 aaPredicted RBP14.75□□□□□ -0.05
VPS18-203ENST00000558855 KCTD17Q8N5Z5 321 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 PJA1Q8NG27 643 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 CALML4Q96GE6 196 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 ZSWIM3Q96MP5 696 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 PGLYRP2Q96PD5 576 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 RTP3Q9BQQ7 232 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 CCSER1Q9C0I3 900 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 DNAJC25Q9H1X3 360 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 PARVGQ9HBI0 331 aa14.75□□□□□ -0.05
VPS18-203ENST00000558855 CPSF3Q9UKF6 684 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms