RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 PPM1LQ5SGD2 360 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 LILRA6Q6PI73 481 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 MPZL3Q6UWV2 235 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 SPATA31D4Q6ZUB0 917 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 ANKS3Q6ZW76 656 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 C1orf186Q6ZWK4 172 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 KCNK18Q7Z418 384 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 CEP120Q8N960 986 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 ANKK1Q8NFD2 765 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 LNX1Q8TBB1 728 aaPredicted RBP8.82□□□□□ -1
TRAF3-205ENST00000558700 NXPE3Q969Y0 559 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 AK8Q96MA6 479 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 ACO2Q99798 780 aaKnown RBP8.82□□□□□ -1
TRAF3-205ENST00000558700 TCHPQ9BT92 498 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 TARS2Q9BW92 718 aaKnown RBP8.82□□□□□ -1
TRAF3-205ENST00000558700 KCNK12Q9HB15 430 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 POLD4Q9HCU8 107 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 ANKFY1Q9P2R3 1169 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 KCNG1Q9UIX4 513 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.82□□□□□ -1
TRAF3-205ENST00000558700 PCDHB9Q9Y5E1 797 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 PCDHB3Q9Y5E6 796 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 ZFP37Q9Y6Q3 630 aaPredicted RBP8.82□□□□□ -1
TRAF3-205ENST00000558700 SMIM28A0A1B0GU29 152 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 PODXLO00592 558 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 TOM1L1O75674 476 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 CD2BP2O95400 341 aaKnown RBP8.81□□□□□ -1
TRAF3-205ENST00000558700 SRFP11831 508 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 KCNE1P15382 129 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 PROZP22891 400 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 TKTP29401 623 aaKnown RBP8.81□□□□□ -1
TRAF3-205ENST00000558700 CLCN5P51795 746 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 CLCNKBP51801 687 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 OSTNP61366 133 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 UPP1Q16831 310 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 TMEM119Q4V9L6 283 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 XKR4Q5GH76 650 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 CWF19L1Q69YN2 538 aaKnown RBP8.81□□□□□ -1
TRAF3-205ENST00000558700 DCLRE1AQ6PJP8 1040 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 ZPBP2Q6X784 338 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 RTL10Q7L3V2 364 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 TAS1R3Q7RTX0 852 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 BRAPQ7Z569 592 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 SCUBE3Q8IX30 993 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 SYT2Q8N9I0 419 aaPredicted RBP8.81□□□□□ -1
TRAF3-205ENST00000558700 FLCNQ8NFG4 579 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 RASSF8Q8NHQ8 419 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 SLC7A14Q8TBB6 771 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 BICD1Q96G01 975 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 CALML4Q96GE6 196 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 TBC1D32Q96NH3 1257 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 ACAP3Q96P50 834 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 PNMA5Q96PV4 448 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 MYADMQ96S97 322 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 CLSTN3Q9BQT9 956 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 CXCL16Q9H2A7 254 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 GOLGA2P5Q9HBQ8 144 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 PTPRHQ9HD43 1115 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 CNTN3Q9P232 1028 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 LARSQ9P2J5 1176 aaKnown RBP8.81□□□□□ -1
TRAF3-205ENST00000558700 ODF2LQ9ULJ1 636 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 NUB1Q9Y5A7 615 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.81□□□□□ -1
TRAF3-205ENST00000558700 BACE2Q9Y5Z0 518 aa8.81□□□□□ -1
TRAF3-205ENST00000558700 CACNA1HO95180 2353 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 TSC2P49815 1807 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 ABLIM1O14639 778 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 SYN3O14994 580 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 PLA2G4BP0C869 781 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 MAPTP10636 758 aaKnown RBP8.8□□□□□ -1
TRAF3-205ENST00000558700 LAMP2P13473 410 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 AOC1P19801 751 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 SCP2P22307 547 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 FSHRP23945 695 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 ABCD1P33897 745 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 MATR3P43243 847 aaKnown RBP eCLIP8.8□□□□□ -1
TRAF3-205ENST00000558700 NCKAP1LP55160 1127 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 SOX4Q06945 474 aaPredicted RBP8.8□□□□□ -1
TRAF3-205ENST00000558700 RAD51AP2Q09MP3 1159 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 HTR4Q13639 388 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 NCOA4Q13772 614 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 RAB33AQ14088 237 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 UVSSAQ2YD98 709 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 EML3Q32P44 896 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 MAP7D1Q3KQU3 841 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 AXDND1Q5T1B0 1012 aaPredicted RBP8.8□□□□□ -1
TRAF3-205ENST00000558700 LARP1BQ659C4 914 aaKnown RBP8.8□□□□□ -1
TRAF3-205ENST00000558700 GPBP1Q86WP2 473 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 SIX5Q8N196 739 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 ZNF687Q8N1G0 1237 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 TMEM105Q8N8V8 129 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 C3orf58Q8NDZ4 430 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 TMEM161BQ8NDZ6 487 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 FAM174AQ8TBP5 190 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 ATOH1Q92858 354 aaPredicted RBP8.8□□□□□ -1
TRAF3-205ENST00000558700 RTP3Q9BQQ7 232 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 POLIQ9UNA4 740 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 CDY1Q9Y6F8 540 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 MIA3Q5JRA6 1907 aa8.8□□□□□ -1
TRAF3-205ENST00000558700 WDFY4Q6ZS81 3184 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms