RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 SLC15A5A6NIM6 579 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 FAM47E-STBD1D6RA91 191 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 ARVCFO00192 962 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 ABLIM1O14639 778 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 SLC27A2O14975 620 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 ADAMTS3O15072 1205 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 ADCY6O43306 1168 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 EFCAB14O75071 495 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 DGKIO75912 1065 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 SNAI1O95863 264 aaPredicted RBP4.95□□□□□ -1.62
SPG11-211ENST00000558561 TFRCP02786 760 aaKnown RBP4.95□□□□□ -1.62
SPG11-211ENST00000558561 PDHBP11177 359 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 RXRAP19793 462 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 SLC1A4P43007 532 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 NCKAP1LP55160 1127 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 FNDC3BQ53EP0 1204 aaKnown RBP4.95□□□□□ -1.62
SPG11-211ENST00000558561 ZNF648Q5T619 568 aaPredicted RBP4.95□□□□□ -1.62
SPG11-211ENST00000558561 OGFOD2Q6N063 350 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 ZC3H14Q6PJT7 736 aaKnown RBP4.95□□□□□ -1.62
SPG11-211ENST00000558561 CENPQQ7L2Z9 268 aaPredicted RBP4.95□□□□□ -1.62
SPG11-211ENST00000558561 UBE2Q1Q7Z7E8 422 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 DPP9Q86TI2 863 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 AMOTL1Q8IY63 956 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 ENAHQ8N8S7 591 aaPredicted RBP4.95□□□□□ -1.62
SPG11-211ENST00000558561 PRPF38AQ8NAV1 312 aaKnown RBP4.95□□□□□ -1.62
SPG11-211ENST00000558561 FBXO15Q8NCQ5 510 aaPredicted RBP4.95□□□□□ -1.62
SPG11-211ENST00000558561 PIP4K2CQ8TBX8 421 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 IGDCC4Q8TDY8 1250 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 U2AF1L4Q8WU68 220 aaKnown RBP4.95□□□□□ -1.62
SPG11-211ENST00000558561 PIBF1Q8WXW3 757 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 KCNN1Q92952 543 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 PEX11GQ96HA9 241 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 PAWRQ96IZ0 340 aaKnown RBP4.95□□□□□ -1.62
SPG11-211ENST00000558561 SLF1Q9BQI6 1058 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 MYL10Q9BUA6 226 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 EPB41L1Q9H4G0 881 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 CNTD2Q9H8S5 307 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 SLC38A10Q9HBR0 1119 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 PDGFCQ9NRA1 345 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 HOMER2Q9NSB8 354 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 TCP11L1Q9NUJ3 509 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 SIRT5Q9NXA8 310 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 ISY1Q9ULR0 285 aaKnown RBP4.95□□□□□ -1.62
SPG11-211ENST00000558561 LCTP09848 1927 aa4.95□□□□□ -1.62
SPG11-211ENST00000558561 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 hCG_1642624A0A1W2PR95 340 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 HRKO00198 91 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 NFIBO00712 420 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 ENPP3O14638 875 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 HGSO14964 777 aaPredicted RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 NKRFO15226 690 aaKnown RBP eCLIP4.94□□□□□ -1.62
SPG11-211ENST00000558561 CYTH3O43739 400 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 DNAJC8O75937 253 aaPredicted RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 GJB1P08034 283 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 TOP1P11387 765 aaKnown RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 ALAS1P13196 640 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 CNGA1P29973 690 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 MAPK4P31152 587 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 ZNF200P98182 395 aaPredicted RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 TMEM62Q0P6H9 643 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 GRB14Q14449 540 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 CCDC96Q2M329 555 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 GJC2Q5T442 439 aaPredicted RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 MAP3K21Q5TCX8 1036 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 STEAP3Q658P3 488 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 CREB3L3Q68CJ9 461 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 SNRNP48Q6IEG0 339 aaKnown RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 ABHD17CQ6PCB6 329 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 SYDE1Q6ZW31 735 aaPredicted RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 MILR1Q7Z6M3 343 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 KIAA0907Q7Z7F0 614 aaPredicted RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 DCP2Q8IU60 420 aaKnown RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 ZC3H7AQ8IWR0 971 aaKnown RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 RBM12BQ8IXT5 1001 aaKnown RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 DHX37Q8IY37 1157 aaKnown RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 MB21D2Q8IYB1 491 aaPredicted RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 SYNPOQ8N3V7 929 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 GMCL1P1Q8NEA9 526 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 CLEC4DQ8WXI8 215 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 ANKS1AQ92625 1134 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 LPAR1Q92633 364 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 MAML3Q96JK9 1138 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.94□□□□□ -1.62
SPG11-211ENST00000558561 JMJD4Q9H9V9 463 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 GCM1Q9NP62 436 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 MBD1Q9UIS9 605 aaPredicted RBP4.94□□□□□ -1.62
SPG11-211ENST00000558561 FEM1BQ9UK73 627 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 NUDT5Q9UKK9 219 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 A0A0G2JMZ2 1700 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 TNKSO95271 1327 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 RPTORQ8N122 1335 aa4.94□□□□□ -1.62
SPG11-211ENST00000558561 MYH6P13533 1939 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 PLIN4Q96Q06 1357 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 TEX51A0A1B0GUA7 166 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 MYADML2A6NDP7 307 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 HIP1O00291 1037 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 ETV2O00321 342 aaPredicted RBP4.93□□□□□ -1.62
SPG11-211ENST00000558561 IFIT3O14879 490 aaKnown RBP4.93□□□□□ -1.62
SPG11-211ENST00000558561 ZBED4O75132 1171 aa4.93□□□□□ -1.62
SPG11-211ENST00000558561 TADA3O75528 432 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms