RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 C3orf58Q8NDZ4 430 aa19.57■□□□□ 0.72
TSPAN3-204ENST00000558394 WASF1Q92558 559 aa19.57■□□□□ 0.72
TSPAN3-204ENST00000558394 CCDC94Q9BW85 323 aaPredicted RBP19.57■□□□□ 0.72
TSPAN3-204ENST00000558394 STK36Q9NRP7 1315 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 CHD6Q8TD26 2715 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 SMIM28A0A1B0GU29 152 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 PODXLO00592 558 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 NEMFO60524 1076 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 PAPSS2O95340 614 aaPredicted RBP19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 SEC24AO95486 1093 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 PMLP29590 882 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 EFNA5P52803 228 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 TWF1Q12792 350 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 ATF7IP2Q5U623 682 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 CD300LGQ6UXG3 332 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 HS6ST3Q8IZP7 471 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 IFT74Q96LB3 600 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 NACC1Q96RE7 527 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 TUFT1Q9NNX1 390 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 GJB4Q9NTQ9 266 aa19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 RBM12Q9NTZ6 932 aaKnown RBP19.56■□□□□ 0.72
TSPAN3-204ENST00000558394 SDK1Q7Z5N4 2213 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 ARHGEF35A5YM69 484 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 FAM205CA6NFA0 338 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 SLC38A8A6NNN8 435 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 K7ESF4 209 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 NRG2O14511 850 aaPredicted RBP19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 AXIN1O15169 862 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 GJA1P17302 382 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 SHC2P98077 582 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 ZNF280DQ6N043 979 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 BSNDQ8WZ55 320 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 CCDC113Q9H0I3 377 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 ARRDC1-AS1Q9H2J1 176 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 TRPV4Q9HBA0 871 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 FBXL5Q9UKA1 691 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 MAFFQ9ULX9 164 aa19.55■□□□□ 0.72
TSPAN3-204ENST00000558394 SPAG17Q6Q759 2223 aa19.54■□□□□ 0.72
TSPAN3-204ENST00000558394 CHADO15335 359 aa19.54■□□□□ 0.72
TSPAN3-204ENST00000558394 CPB1P15086 417 aa19.54■□□□□ 0.72
TSPAN3-204ENST00000558394 NR5A1Q13285 461 aa19.54■□□□□ 0.72
TSPAN3-204ENST00000558394 TEAD2Q15562 447 aa19.54■□□□□ 0.72
TSPAN3-204ENST00000558394 PADI6Q6TGC4 694 aa19.54■□□□□ 0.72
TSPAN3-204ENST00000558394 Q6ZS52 159 aa19.54■□□□□ 0.72
TSPAN3-204ENST00000558394 HAUS6Q7Z4H7 955 aa19.54■□□□□ 0.72
TSPAN3-204ENST00000558394 WDR5BQ86VZ2 330 aa19.54■□□□□ 0.72
TSPAN3-204ENST00000558394 PDRG1Q9NUG6 133 aa19.54■□□□□ 0.72
TSPAN3-204ENST00000558394 AFF4Q9UHB7 1163 aaKnown RBP19.54■□□□□ 0.72
TSPAN3-204ENST00000558394 RALYQ9UKM9 306 aaKnown RBP19.54■□□□□ 0.72
TSPAN3-204ENST00000558394 DPYSL4O14531 572 aa19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 CYP11B2P19099 503 aa19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 MARCKSP29966 332 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 SOX9P48436 509 aa19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 OSTNP61366 133 aa19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 SCRN1Q12765 414 aa19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 SF3A2Q15428 464 aaKnown RBP19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 CENPQQ7L2Z9 268 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 RALGPS2Q86X27 583 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 CATSPER3Q86XQ3 398 aa19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 APPL2Q8NEU8 664 aa19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 LOXL4Q96JB6 756 aa19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 CEP72Q9P209 647 aa19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 ORC3Q9UBD5 711 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-204ENST00000558394 SPECC1L-ADORA2AF8WAN1 911 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 K7ERI5 159 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 ARNTLO00327 626 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 MOSPD3O75425 235 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 EDN1P05305 212 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 ZNF806P0C7X5 589 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 SPATA31C1P0DKV0 1188 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 RPL9P32969 192 aaKnown RBP19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 MCM4P33991 863 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 GRM5P41594 1212 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 EPHA5P54756 1037 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 SOX4Q06945 474 aaPredicted RBP19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 PLD1Q13393 1074 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 CCDC6Q16204 474 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 CACNA2D4Q7Z3S7 1137 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 ERMNQ8TAM6 284 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 KIFC3Q9BVG8 833 aa19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 SH2B1Q9NRF2 756 aaPredicted RBP19.52■□□□□ 0.72
TSPAN3-204ENST00000558394 CITO14578 2027 aa19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 FAM208BQ5VWN6 2430 aa19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 CCDC192P0DO97 292 aa19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 HOXA6P31267 233 aa19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 CTHP32929 405 aa19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 MRPL58Q14197 206 aaKnown RBP19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 PON2Q15165 354 aa19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 ZNF568Q3ZCX4 644 aa19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 NT5DC1Q5TFE4 455 aa19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 STPG1Q5TH74 334 aa19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 SYNPOQ8N3V7 929 aa19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 KIFAP3Q92845 792 aa19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 TM6SF1Q9BZW5 370 aa19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 TNFSF13BQ9Y275 285 aa19.51■□□□□ 0.71
TSPAN3-204ENST00000558394 A0A1W2PRU2 124 aa19.5■□□□□ 0.71
TSPAN3-204ENST00000558394 MYBPHLA2RUH7 354 aa19.5■□□□□ 0.71
TSPAN3-204ENST00000558394 MED24O75448 989 aa19.5■□□□□ 0.71
TSPAN3-204ENST00000558394 RPP40O75818 363 aaKnown RBP19.5■□□□□ 0.71
TSPAN3-204ENST00000558394 PROS1P07225 676 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms