RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SNTG2Q9NY99 539 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 RGL1Q9NZL6 768 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 WRAP73Q9P2S5 460 aaPredicted RBP5.72□□□□□ -1.49
SPG11-208ENST00000558155 CACNG4Q9UBN1 327 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 VAV3Q9UKW4 847 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 MAFFQ9ULX9 164 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 PCDHGA5Q9Y5G8 931 aa5.72□□□□□ -1.49
SPG11-208ENST00000558155 SPAG17Q6Q759 2223 aa5.71□□□□□ -1.49
SPG11-208ENST00000558155 CCDC163A0A0D9SF12 145 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 CCDC194A0A1B0GVG4 234 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 LRRIQ4A6NIV6 560 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 SOBPA7XYQ1 873 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 HEPACAM2A8MVW5 462 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 C1QTNF9BB2RNN3 333 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 M0R2N6 131 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 DPYSL4O14531 572 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 PTGESO14684 152 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 CHADO15335 359 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 B4GALT5O43286 388 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 SLC37A4O43826 429 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 CCNT1O60563 726 aaKnown RBP5.71□□□□□ -1.5
SPG11-208ENST00000558155 ATG13O75143 517 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 RPP40O75818 363 aaKnown RBP5.71□□□□□ -1.5
SPG11-208ENST00000558155 RECQL4O94761 1208 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 EPN2O95208 641 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 LYPLA2O95372 231 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 DEXIO95424 95 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 C1QTNF9P0C862 333 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 CCDC192P0DO97 292 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 VIPR2P41587 438 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 RAP1GAPP47736 663 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 ARPP19P56211 112 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 CCT2P78371 535 aaKnown RBP5.71□□□□□ -1.5
SPG11-208ENST00000558155 KCNC4Q03721 635 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 CAPSQ13938 189 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 PTPAQ15257 358 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 FAM187BQ17R55 369 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 INF2Q27J81 1249 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 DAB2IPQ5VWQ8 1189 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 TPGS2Q68CL5 300 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 NCAPH2Q6IBW4 605 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 SLC8B1Q6J4K2 584 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 PSAPL1Q6NUJ1 521 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 CPLX2Q6PUV4 134 aaKnown RBP5.71□□□□□ -1.5
SPG11-208ENST00000558155 BLOC1S2Q6QNY1 142 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 LRSAM1Q6UWE0 723 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 HAUS6Q7Z4H7 955 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 NEK8Q86SG6 692 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 LAPTM4BQ86VI4 370 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 RALGPS2Q86X27 583 aaPredicted RBP5.71□□□□□ -1.5
SPG11-208ENST00000558155 SLFN12Q8IYM2 578 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 FBXL16Q8N461 479 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 DAGLBQ8NCG7 672 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 ZSCAN18Q8TBC5 510 aaPredicted RBP5.71□□□□□ -1.5
SPG11-208ENST00000558155 GAB3Q8WWW8 586 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 TCEAL4Q96EI5 215 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 ZSWIM3Q96MP5 696 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 POLR3FQ9H1D9 316 aaPredicted RBP5.71□□□□□ -1.5
SPG11-208ENST00000558155 C2orf40Q9H1Z8 148 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 FZD8Q9H461 694 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 KCNMB3Q9NPA1 279 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 VPS45Q9NRW7 570 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 RBM12Q9NTZ6 932 aaKnown RBP5.71□□□□□ -1.5
SPG11-208ENST00000558155 FAM208BQ5VWN6 2430 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 VWA8A3KMH1 1905 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 TICRRQ7Z2Z1 1910 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 BAHCC1Q9P281 2608 aa5.71□□□□□ -1.5
SPG11-208ENST00000558155 VPS13AQ96RL7 3174 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 TRIP11Q15643 1979 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 MYBPHLA2RUH7 354 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 SPECC1L-ADORA2AF8WAN1 911 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 ACKR2O00590 384 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 CPLX1O14810 134 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 SYN3O14994 580 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 AKAP3O75969 853 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 RHOBTB1O94844 696 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 MYL4P12829 197 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 XBP1P17861 261 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 PSMA5P28066 241 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 TKTP29401 623 aaKnown RBP5.7□□□□□ -1.5
SPG11-208ENST00000558155 MARCKSP29966 332 aaPredicted RBP5.7□□□□□ -1.5
SPG11-208ENST00000558155 PDIA3P30101 505 aaKnown RBP5.7□□□□□ -1.5
SPG11-208ENST00000558155 CCR2P41597 374 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 BRCC3P46736 316 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 NOVA1P51513 510 aaKnown RBP5.7□□□□□ -1.5
SPG11-208ENST00000558155 CLCNKBP51801 687 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 ROR1Q01973 937 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 CYP4A11Q02928 519 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 FOXC1Q12948 553 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 PRPF4BQ13523 1007 aaKnown RBP5.7□□□□□ -1.5
SPG11-208ENST00000558155 TEAD2Q15562 447 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 NAB2Q15742 525 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 CCDC6Q16204 474 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 MAPK6Q16659 721 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 UPP1Q16831 310 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 ARHGAP29Q52LW3 1261 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 PLA2G2CQ5R387 149 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 MAEAQ7L5Y9 396 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 KBTBD6Q86V97 674 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 NOSTRINQ8IVI9 506 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms