RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 TBC1D4O60343 1298 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 PIGRP01833 764 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 ABCD1P33897 745 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 TNFSF9P41273 254 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 ZNF131P52739 623 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 GPC5P78333 572 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 GRIN1Q05586 938 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 MRPL58Q14197 206 aaKnown RBP15.93■□□□□ 0.14
SHMT2-235ENST00000557740 PHLDB3Q6NSJ2 640 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 FRMD5Q7Z6J6 570 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 TCEAL8Q8IYN2 117 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 LRRC15Q8TF66 581 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 DDX12PQ92771 950 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 KCNN1Q92952 543 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 CORO1BQ9BR76 489 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 MSTO1Q9BUK6 570 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 RPP25Q9BUL9 199 aaKnown RBP15.93■□□□□ 0.14
SHMT2-235ENST00000557740 HAPLN2Q9GZV7 340 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 RPF1Q9H9Y2 349 aaKnown RBP15.93■□□□□ 0.14
SHMT2-235ENST00000557740 GDE1Q9NZC3 331 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 OGTO15294 1046 aa15.92■□□□□ 0.14
SHMT2-235ENST00000557740 CEBPBP17676 345 aa15.92■□□□□ 0.14
SHMT2-235ENST00000557740 PTPN2P17706 415 aa15.92■□□□□ 0.14
SHMT2-235ENST00000557740 CYP3A5P20815 502 aa15.92■□□□□ 0.14
SHMT2-235ENST00000557740 LRPAP1P30533 357 aa15.92■□□□□ 0.14
SHMT2-235ENST00000557740 PFKPQ01813 784 aa15.92■□□□□ 0.14
SHMT2-235ENST00000557740 ADCY1Q08828 1119 aa15.92■□□□□ 0.14
SHMT2-235ENST00000557740 SLC5A9Q2M3M2 681 aa15.92■□□□□ 0.14
SHMT2-235ENST00000557740 SPECC1Q5M775 1068 aa15.92■□□□□ 0.14
SHMT2-235ENST00000557740 AVENQ9NQS1 362 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-235ENST00000557740 AFF4Q9UHB7 1163 aaKnown RBP15.92■□□□□ 0.14
SHMT2-235ENST00000557740 MAFFQ9ULX9 164 aa15.92■□□□□ 0.14
SHMT2-235ENST00000557740 SIT1Q9Y3P8 196 aa15.92■□□□□ 0.14
SHMT2-235ENST00000557740 TRIP11Q15643 1979 aa15.92■□□□□ 0.14
SHMT2-235ENST00000557740 CITO14578 2027 aa15.92■□□□□ 0.14
SHMT2-235ENST00000557740 LACTBL1A8MY62 500 aa15.91■□□□□ 0.14
SHMT2-235ENST00000557740 SEC24AO95486 1093 aa15.91■□□□□ 0.14
SHMT2-235ENST00000557740 YWHAHQ04917 246 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-235ENST00000557740 CUL4AQ13619 759 aa15.91■□□□□ 0.14
SHMT2-235ENST00000557740 ENOX2Q16206 610 aaKnown RBP15.91■□□□□ 0.14
SHMT2-235ENST00000557740 ZBTB41Q5SVQ8 909 aa15.91■□□□□ 0.14
SHMT2-235ENST00000557740 IQCEQ6IPM2 695 aa15.91■□□□□ 0.14
SHMT2-235ENST00000557740 PDZD4Q76G19 769 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-235ENST00000557740 USP37Q86T82 979 aa15.91■□□□□ 0.14
SHMT2-235ENST00000557740 MAP4K3Q8IVH8 894 aa15.91■□□□□ 0.14
SHMT2-235ENST00000557740 KRI1Q8N9T8 703 aaKnown RBP15.91■□□□□ 0.14
SHMT2-235ENST00000557740 NKD2Q969F2 451 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-235ENST00000557740 FAM212AQ96EL1 285 aa15.91■□□□□ 0.14
SHMT2-235ENST00000557740 MCRS1Q96EZ8 462 aa15.91■□□□□ 0.14
SHMT2-235ENST00000557740 TSPAN18Q96SJ8 248 aa15.91■□□□□ 0.14
SHMT2-235ENST00000557740 PTPRZ1P23471 2315 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-235ENST00000557740 RIF1Q5UIP0 2472 aaKnown RBP15.9■□□□□ 0.14
SHMT2-235ENST00000557740 MYH11P35749 1972 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 A0A0B4J269 797 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 PRR23AA6NEV1 266 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 M0QZQ0 153 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 ZNF197O14709 1029 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 FAM189A1O60320 539 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 ECI2O75521 394 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 DCNP07585 359 aaKnown RBP15.9■□□□□ 0.14
SHMT2-235ENST00000557740 NMT1P30419 496 aaKnown RBP15.9■□□□□ 0.14
SHMT2-235ENST00000557740 TXLNAP40222 546 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 GUCY2FP51841 1108 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 SNW1Q13573 536 aaKnown RBP15.9■□□□□ 0.14
SHMT2-235ENST00000557740 MLF2Q15773 248 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-235ENST00000557740 CYP4A22Q5TCH4 519 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 DSTYKQ6XUX3 929 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 ASCL5Q7RTU5 278 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 CD302Q8IX05 232 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 TMEM130Q8N3G9 435 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 BEST2Q8NFU1 509 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 PJA1Q8NG27 643 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 OXCT2Q9BYC2 517 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-235ENST00000557740 FOXQ1Q9C009 403 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 CCSER1Q9C0I3 900 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 STK17AQ9UEE5 414 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 CCDC39Q9UFE4 941 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 TIMM13Q9Y5L4 95 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-235ENST00000557740 CLIC4Q9Y696 253 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 DOCK6Q96HP0 2047 aa15.9■□□□□ 0.14
SHMT2-235ENST00000557740 OAZ2O95190 189 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 DDIT3P35638 169 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 AARSP49588 968 aaKnown RBP eCLIP15.89■□□□□ 0.13
SHMT2-235ENST00000557740 STARD6P59095 220 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 GTF2BQ00403 316 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 PRKCQQ04759 706 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 TWF1Q12792 350 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 ZBTB6Q15916 424 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 PRSS36Q5K4E3 855 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 JADE1Q6IE81 842 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 RNF19BQ6ZMZ0 732 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 EPSTI1Q96J88 318 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 ZNF512Q96ME7 567 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-235ENST00000557740 FIZ1Q96SL8 496 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 ASAH2Q9NR71 780 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 YIPF1Q9Y548 306 aa15.89■□□□□ 0.13
SHMT2-235ENST00000557740 KANSL1LA0AUZ9 987 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 OR6C75A6NL08 312 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 ADRB2P07550 413 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 NFICP08651 508 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms