RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 ITGA4P13612 1032 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 YWHAEP62258 255 aaKnown RBP11.02□□□□□ -0.65
GABRB3-212ENST00000557641 KRT83P78385 493 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 RBP5P82980 135 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 KLHL30Q0D2K2 578 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 ZBTB6Q15916 424 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 VPS36Q86VN1 386 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 PPM1KQ8N3J5 372 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 TXLNBQ8N3L3 684 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 SMG8Q8ND04 991 aaKnown RBP11.02□□□□□ -0.65
GABRB3-212ENST00000557641 HELQQ8TDG4 1101 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 SHC3Q92529 594 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 APBB2Q92870 758 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 NXF3Q9H4D5 531 aaKnown RBP11.02□□□□□ -0.65
GABRB3-212ENST00000557641 C11orf49Q9H6J7 331 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 VRTNQ9H8Y1 702 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 NHEJ1Q9H9Q4 299 aaPredicted RBP11.02□□□□□ -0.65
GABRB3-212ENST00000557641 SLC38A7Q9NVC3 462 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 PARP2Q9UGN5 583 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 GIT1Q9Y2X7 761 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 EPN1Q9Y6I3 576 aaPredicted RBP11.02□□□□□ -0.65
GABRB3-212ENST00000557641 FRMPD3Q5JV73 1810 aa11.02□□□□□ -0.65
GABRB3-212ENST00000557641 GRXCR2A6NFK2 248 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 EIF3CLB5ME19 914 aaKnown RBP11.01□□□□□ -0.65
GABRB3-212ENST00000557641 MEFVO15553 781 aaPredicted RBP11.01□□□□□ -0.65
GABRB3-212ENST00000557641 NDUFA10O95299 355 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 CST3P01034 146 aaPredicted RBP11.01□□□□□ -0.65
GABRB3-212ENST00000557641 NFICP08651 508 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 CCDC175P0C221 793 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 P4HA1P13674 534 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 BPIFB4P59827 614 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 NOP14P78316 857 aaKnown RBP11.01□□□□□ -0.65
GABRB3-212ENST00000557641 APBA1Q02410 837 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 TDRD12Q587J7 1177 aaKnown RBP11.01□□□□□ -0.65
GABRB3-212ENST00000557641 HGSNATQ68CP4 663 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 GJB7Q6PEY0 223 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 IRF2BP2Q7Z5L9 587 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 ARHGEF19Q8IW93 802 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 TTC39CQ8N584 583 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 LRRC52Q8N7C0 313 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 C1orf127Q8N9H9 656 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 RSPH1Q8WYR4 309 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 EIF3CQ99613 913 aaKnown RBP11.01□□□□□ -0.65
GABRB3-212ENST00000557641 CHP1Q99653 195 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 EPAS1Q99814 870 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 IFIH1Q9BYX4 1025 aaKnown RBP11.01□□□□□ -0.65
GABRB3-212ENST00000557641 DEF6Q9H4E7 631 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 LUC7LQ9NQ29 371 aaKnown RBP11.01□□□□□ -0.65
GABRB3-212ENST00000557641 RGS18Q9NS28 235 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 DPP3Q9NY33 737 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 ARHGAP20Q9P2F6 1191 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 PCDHGA10Q9Y5H3 936 aa11.01□□□□□ -0.65
GABRB3-212ENST00000557641 SMIM28A0A1B0GU29 152 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 SOWAHDA6NJG2 315 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 FOXN3O00409 490 aaPredicted RBP11□□□□□ -0.65
GABRB3-212ENST00000557641 PQBP1O60828 265 aaKnown RBP11□□□□□ -0.65
GABRB3-212ENST00000557641 OFD1O75665 1012 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 LCA5LO95447 670 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 EOMESO95936 686 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 TUBB4AP04350 444 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 ATF7P17544 494 aaPredicted RBP11□□□□□ -0.65
GABRB3-212ENST00000557641 PAX3P23760 479 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 AKAP5P24588 427 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 PNPLA4P41247 253 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 MYL6P60660 151 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 TLE2Q04725 743 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 MYO1EQ12965 1108 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 CUL2Q13617 745 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 SPA17Q15506 151 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 ARHGAP44Q17R89 818 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 ZNF699Q32M78 642 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 ZNF667Q5HYK9 610 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 C10orf76Q5T2E6 689 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 RAD9BQ6WBX8 426 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 SLC24A5Q71RS6 500 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 NECAB2Q7Z6G3 386 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 FAM71AQ8IYT1 594 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 CCAR2Q8N163 923 aaKnown RBP11□□□□□ -0.65
GABRB3-212ENST00000557641 SEPT8Q92599 483 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 TATDN2Q93075 761 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 ZDHHC16Q969W1 377 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 ADAM2Q99965 735 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 GPR88Q9GZN0 384 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 NIF3L1Q9GZT8 377 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 XYLT2Q9H1B5 865 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 HIPK3Q9H422 1215 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 CYP3A43Q9HB55 503 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 CNTN6Q9UQ52 1028 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 HES2Q9Y543 173 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 ADGRG1Q9Y653 693 aa11□□□□□ -0.65
GABRB3-212ENST00000557641 RBAK-RBAKDNI3L0D1 243 aa10.99□□□□□ -0.65
GABRB3-212ENST00000557641 INPPL1O15357 1258 aa10.99□□□□□ -0.65
GABRB3-212ENST00000557641 AKR1B10O60218 316 aa10.99□□□□□ -0.65
GABRB3-212ENST00000557641 ITGB3P05106 788 aa10.99□□□□□ -0.65
GABRB3-212ENST00000557641 KRT19P08727 400 aa10.99□□□□□ -0.65
GABRB3-212ENST00000557641 FAM163BP0C2L3 166 aa10.99□□□□□ -0.65
GABRB3-212ENST00000557641 RFC2P35250 354 aa10.99□□□□□ -0.65
GABRB3-212ENST00000557641 EIF4A3P38919 411 aaKnown RBP10.99□□□□□ -0.65
GABRB3-212ENST00000557641 FAM189BP81408 668 aa10.99□□□□□ -0.65
GABRB3-212ENST00000557641 FAAP100Q0VG06 881 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms