RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 DENND1AQ8TEH3 1009 aa11.11□□□□□ -0.63
SUPT16H-207ENST00000557394 CLIP3Q96DZ5 547 aa11.11□□□□□ -0.63
SUPT16H-207ENST00000557394 SH3GL1Q99961 368 aa11.11□□□□□ -0.63
SUPT16H-207ENST00000557394 BTBD10Q9BSF8 475 aa11.11□□□□□ -0.63
SUPT16H-207ENST00000557394 SYT11Q9BT88 431 aa11.11□□□□□ -0.63
SUPT16H-207ENST00000557394 EPB41L1Q9H4G0 881 aa11.11□□□□□ -0.63
SUPT16H-207ENST00000557394 AVENQ9NQS1 362 aaPredicted RBP11.11□□□□□ -0.63
SUPT16H-207ENST00000557394 METTL5Q9NRN9 209 aaKnown RBP11.11□□□□□ -0.63
SUPT16H-207ENST00000557394 WHRNQ9P202 907 aa11.11□□□□□ -0.63
SUPT16H-207ENST00000557394 AJAP1Q9UKB5 411 aaPredicted RBP11.11□□□□□ -0.63
SUPT16H-207ENST00000557394 USTQ9Y2C2 406 aa11.11□□□□□ -0.63
SUPT16H-207ENST00000557394 A0A0B4J203 849 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 GRXCR2A6NFK2 248 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 TMEM221A6NGB7 291 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 FAM47DPA6NHR8 397 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 FAM196BA6NMK8 535 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 MIF4GDA9UHW6 222 aaKnown RBP11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 BTBD19C9JJ37 291 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 ZWINTO95229 277 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 CETPP11597 493 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 DNAJC3Q13217 504 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 EXOC3L4Q17RC7 722 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 SMUG1Q53HV7 270 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 RC3H1Q5TC82 1133 aaKnown RBP11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 FIP1L1Q6UN15 594 aaKnown RBP11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 CLNKQ7Z7G1 428 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 NEK8Q86SG6 692 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 ANKRD35Q8N283 1001 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 C12orf50Q8NA57 414 aaPredicted RBP11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 CTNNBL1Q8WYA6 563 aaPredicted RBP11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 LENG1Q96BZ8 264 aaPredicted RBP11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 PTCD3Q96EY7 689 aaKnown RBP11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 DDX50Q9BQ39 737 aaKnown RBP11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 ETNK2Q9NVF9 386 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 ZFP69BQ9UJL9 534 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 CDH16O75309 829 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 CYP1A2P05177 515 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 ZCCHC18P0CG32 403 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 HMGB2P26583 209 aaKnown RBP11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 NEK3P51956 506 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 TAGLNQ01995 201 aaKnown RBP11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 GRM4Q14833 912 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 EPHA7Q15375 998 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 PDK4Q16654 411 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 SLC27A3Q5K4L6 730 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 AADACL2Q6P093 401 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 KIF6Q6ZMV9 814 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 CEP128Q6ZU80 1094 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 MIGA2Q7L4E1 593 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 KCNK18Q7Z418 384 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 FRMD5Q7Z6J6 570 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 CCDC25Q86WR0 208 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 WDR66Q8TBY9 1149 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 SLCO2A1Q92959 643 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 SH3KBP1Q96B97 665 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 TUBB6Q9BUF5 446 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 FGFBP2Q9BYJ0 223 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 PPCSQ9HAB8 311 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 LRP2BPQ9P2M1 347 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 NAALADL1Q9UQQ1 740 aa11.1□□□□□ -0.63
SUPT16H-207ENST00000557394 A8MXQ7 604 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 PRPF4O43172 522 aaKnown RBP eCLIP11.09□□□□□ -0.632e-6■■■■□ 21.6
SUPT16H-207ENST00000557394 HNRNPRO43390 633 aaKnown RBP11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 EXOC3O60645 756 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 VAV1P15498 845 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 CCNFP41002 786 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 CALCOCO2Q13137 446 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 MAP7Q14244 749 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 CTTNQ14247 550 aaKnown RBP11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 SIX1Q15475 284 aaPredicted RBP11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 C11orf63Q6NUN7 778 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 EPM2AIP1Q7L775 607 aaPredicted RBP11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 NLRP9Q7RTR0 991 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 JAZF1Q86VZ6 243 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 SRRM1Q8IYB3 904 aaKnown RBP11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 SH3RF3Q8TEJ3 882 aaPredicted RBP11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 MAML1Q92585 1016 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 TCHPQ9BT92 498 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 VPS33BQ9H267 617 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 SLCO1B3Q9NPD5 702 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 NUP98P52948 1817 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 BAZ2AQ9UIF9 1905 aaKnown RBP11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 PFDN1O60925 122 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 CRABP2P29373 138 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 CHKAP35790 457 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 CLCN2P51788 898 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 SEPT14Q6ZU15 432 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 SPATA24Q86W54 205 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 ST13P4Q8IZP2 240 aaPredicted RBP11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 LRRC43Q8N309 656 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 RIBC1Q8N443 379 aaPredicted RBP11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 SCFD1Q8WVM8 642 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 WDR60Q8WVS4 1066 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 SPOCK2Q92563 424 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 ARHGEF26Q96DR7 871 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 C2orf49Q9BVC5 232 aaPredicted RBP11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 UBN1Q9NPG3 1134 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 QPCTLQ9NXS2 382 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 ANGPTL2Q9UKU9 493 aa11.09□□□□□ -0.63
SUPT16H-207ENST00000557394 NUMBLQ9Y6R0 609 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms