RNA–Protein interactions for RNA: ENST00000557365.1

APEX1-219, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-219ENST00000557365 ZNF689Q96CS4 500 aaPredicted RBP12.91□□□□□ -0.34
APEX1-219ENST00000557365 ZNF560Q96MR9 790 aa12.91□□□□□ -0.34
APEX1-219ENST00000557365 NAA15Q9BXJ9 866 aaKnown RBP12.91□□□□□ -0.34
APEX1-219ENST00000557365 GANQ9H2C0 597 aa12.91□□□□□ -0.34
APEX1-219ENST00000557365 RC3H2Q9HBD1 1191 aaKnown RBP12.91□□□□□ -0.34
APEX1-219ENST00000557365 PLAGL2Q9UPG8 496 aa12.91□□□□□ -0.34
APEX1-219ENST00000557365 PTPRSQ13332 1948 aa12.91□□□□□ -0.34
APEX1-219ENST00000557365 COL4A6Q14031 1691 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 TMEM189-UBE2V1I3L0A0 370 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 FGFR1P11362 822 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 P4HA1P13674 534 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 UCHL3P15374 230 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 TRIM21P19474 475 aaKnown RBP12.9□□□□□ -0.34
APEX1-219ENST00000557365 AFF1P51825 1210 aaKnown RBP12.9□□□□□ -0.34
APEX1-219ENST00000557365 EPHB4P54760 987 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 GSDMDP57764 484 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 MYL6P60660 151 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 ZBED6P86452 979 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 SOX4Q06945 474 aaPredicted RBP12.9□□□□□ -0.34
APEX1-219ENST00000557365 GLRA4Q5JXX5 417 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 PHLDB3Q6NSJ2 640 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 DCLRE1AQ6PJP8 1040 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 TMC6Q7Z403 805 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 PPFIBP1Q86W92 1011 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 CMTR2Q8IYT2 770 aaKnown RBP12.9□□□□□ -0.34
APEX1-219ENST00000557365 C18orf25Q96B23 403 aaPredicted RBP12.9□□□□□ -0.34
APEX1-219ENST00000557365 HPDLQ96IR7 371 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 PCMTD1Q96MG8 357 aaPredicted RBP12.9□□□□□ -0.34
APEX1-219ENST00000557365 SLC9A7Q96T83 725 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.9□□□□□ -0.34
APEX1-219ENST00000557365 TMEM175Q9BSA9 504 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 LSM14BQ9BX40 385 aaKnown RBP12.9□□□□□ -0.34
APEX1-219ENST00000557365 STK33Q9BYT3 514 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 CYP3A43Q9HB55 503 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 TBC1D13Q9NVG8 400 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 GDAP2Q9NXN4 497 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 TUBGCP4Q9UGJ1 667 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 ZMYND8Q9ULU4 1186 aaPredicted RBP12.9□□□□□ -0.34
APEX1-219ENST00000557365 AGAP1Q9UPQ3 857 aa12.9□□□□□ -0.34
APEX1-219ENST00000557365 GYPCP04921 128 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 SYN1P17600 705 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 POLR2BP30876 1174 aaKnown RBP12.89□□□□□ -0.35
APEX1-219ENST00000557365 HNRNPH3P31942 346 aaKnown RBP12.89□□□□□ -0.35
APEX1-219ENST00000557365 AARSP49588 968 aaKnown RBP eCLIP12.89□□□□□ -0.357e-6■□□□□ 11.2
APEX1-219ENST00000557365 TAF6P49848 677 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 MFAP3P55082 362 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 NOP14P78316 857 aaKnown RBP12.89□□□□□ -0.35
APEX1-219ENST00000557365 HTRA4P83105 476 aaPredicted RBP12.89□□□□□ -0.35
APEX1-219ENST00000557365 UPP1Q16831 310 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 ZNF699Q32M78 642 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 SV2CQ496J9 727 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 ZNF667Q5HYK9 610 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 DPH6Q7L8W6 267 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 OTOP2Q7RTS6 562 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 LIMS2Q7Z4I7 341 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 CNGA4Q8IV77 575 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 DRC7Q8IY82 874 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 COLGALT2Q8IYK4 626 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 LRRC43Q8N309 656 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 ZNF397Q8NF99 534 aaPredicted RBP12.89□□□□□ -0.35
APEX1-219ENST00000557365 SPATA18Q8TC71 538 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 SYN2Q92777 582 aaPredicted RBP12.89□□□□□ -0.35
APEX1-219ENST00000557365 NIF3L1Q9GZT8 377 aa12.89□□□□□ -0.35
APEX1-219ENST00000557365 FAM207AQ9NSI2 230 aaPredicted RBP12.89□□□□□ -0.35
APEX1-219ENST00000557365 LUC7L2Q9Y383 392 aaKnown RBP12.89□□□□□ -0.35
APEX1-219ENST00000557365 ARHGEF37A1IGU5 675 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 GJB5O95377 273 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 POMCP01189 267 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 KRT19P08727 400 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 KLK7P49862 253 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 JAM2P57087 298 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 LILRA4P59901 499 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 YWHAEP62258 255 aaKnown RBP12.88□□□□□ -0.35
APEX1-219ENST00000557365 DEFB103AP81534 67 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 RNASELQ05823 741 aaKnown RBP12.88□□□□□ -0.35
APEX1-219ENST00000557365 SHC3Q92529 594 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 BAP1Q92560 729 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 TATDN2Q93075 761 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 FAM84AQ96KN4 292 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 FAM193BQ96PV7 902 aaPredicted RBP12.88□□□□□ -0.35
APEX1-219ENST00000557365 BCO2Q9BYV7 579 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 APOBEC3GQ9HC16 384 aaKnown RBP12.88□□□□□ -0.35
APEX1-219ENST00000557365 UBE2TQ9NPD8 197 aaPredicted RBP12.88□□□□□ -0.35
APEX1-219ENST00000557365 DNAJC12Q9UKB3 198 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 CNTN6Q9UQ52 1028 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 INPP5FQ9Y2H2 1132 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 NUB1Q9Y5A7 615 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 SLC4A7Q9Y6M7 1214 aa12.88□□□□□ -0.35
APEX1-219ENST00000557365 TBKBP1A7MCY6 615 aa12.87□□□□□ -0.35
APEX1-219ENST00000557365 KPNA7A9QM74 516 aa12.87□□□□□ -0.35
APEX1-219ENST00000557365 AKR1B15C9JRZ8 316 aaPredicted RBP12.87□□□□□ -0.35
APEX1-219ENST00000557365 PODXLO00592 558 aa12.87□□□□□ -0.35
APEX1-219ENST00000557365 EPHB6O15197 1021 aa12.87□□□□□ -0.35
APEX1-219ENST00000557365 LRRN2O75325 713 aa12.87□□□□□ -0.35
APEX1-219ENST00000557365 DDHD2O94830 711 aa12.87□□□□□ -0.35
APEX1-219ENST00000557365 ALDH2P05091 517 aa12.87□□□□□ -0.35
APEX1-219ENST00000557365 CASP14P31944 242 aa12.87□□□□□ -0.35
APEX1-219ENST00000557365 CLCNKBP51801 687 aa12.87□□□□□ -0.35
APEX1-219ENST00000557365 GUCY2FP51841 1108 aa12.87□□□□□ -0.35
APEX1-219ENST00000557365 POLR2FP61218 127 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms