RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 TBX20Q9UMR3 447 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 COL4A3Q01955 1670 aa15.44■□□□□ 0.06
SNX6-210ENST00000557341 TTC26A0AVF1 554 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 ARHGEF37A1IGU5 675 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 OGTO15294 1046 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 PI15O43692 258 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 TRAK2O60296 914 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 TBC1D4O60343 1298 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 GFRA3O60609 400 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 ABLIM3O94929 683 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 LRPAP1P30533 357 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 TNFSF9P41273 254 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 ARPP19P56211 112 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 SPAG1Q07617 926 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 MRPL58Q14197 206 aaKnown RBP15.43■□□□□ 0.06
SNX6-210ENST00000557341 PARM1Q6UWI2 310 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 ST13P5Q8NFI4 369 aaPredicted RBP15.43■□□□□ 0.06
SNX6-210ENST00000557341 DDX12PQ92771 950 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 CCSER1Q9C0I3 900 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 ZHX3Q9H4I2 956 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 TBC1D17Q9HA65 648 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 FBXL5Q9UKA1 691 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 UBQLN1Q9UMX0 589 aaKnown RBP15.43■□□□□ 0.06
SNX6-210ENST00000557341 PCDHB8Q9UN66 801 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 MRPS23Q9Y3D9 190 aaKnown RBP15.43■□□□□ 0.06
SNX6-210ENST00000557341 OBSL1O75147 1896 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 WDR87Q6ZQQ6 2873 aa15.43■□□□□ 0.06
SNX6-210ENST00000557341 ZNF638Q14966 1978 aaKnown RBP15.42■□□□□ 0.06
SNX6-210ENST00000557341 PROB1E7EW31 1015 aa15.42■□□□□ 0.06
SNX6-210ENST00000557341 FAM189A1O60320 539 aa15.42■□□□□ 0.06
SNX6-210ENST00000557341 RHOP08100 348 aa15.42■□□□□ 0.06
SNX6-210ENST00000557341 TPGS2Q68CL5 300 aa15.42■□□□□ 0.06
SNX6-210ENST00000557341 MAP4K3Q8IVH8 894 aa15.42■□□□□ 0.06
SNX6-210ENST00000557341 TCEAL8Q8IYN2 117 aa15.42■□□□□ 0.06
SNX6-210ENST00000557341 ING5Q8WYH8 240 aa15.42■□□□□ 0.06
SNX6-210ENST00000557341 RPF1Q9H9Y2 349 aaKnown RBP15.42■□□□□ 0.06
SNX6-210ENST00000557341 CYP4F11Q9HBI6 524 aa15.42■□□□□ 0.06
SNX6-210ENST00000557341 AVENQ9NQS1 362 aaPredicted RBP15.42■□□□□ 0.06
SNX6-210ENST00000557341 INSL5Q9Y5Q6 135 aa15.42■□□□□ 0.06
SNX6-210ENST00000557341 M0QZQ0 153 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 CPB1P15086 417 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 CYP3A5P20815 502 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 MARCKSP29966 332 aaPredicted RBP15.41■□□□□ 0.06
SNX6-210ENST00000557341 TXLNAP40222 546 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 NBL1P41271 181 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 YWHAHQ04917 246 aaPredicted RBP15.41■□□□□ 0.06
SNX6-210ENST00000557341 ZBTB6Q15916 424 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 ENOX2Q16206 610 aaKnown RBP15.41■□□□□ 0.06
SNX6-210ENST00000557341 SLC5A9Q2M3M2 681 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 ZBTB41Q5SVQ8 909 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 PHLDB3Q6NSJ2 640 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 KRI1Q8N9T8 703 aaKnown RBP15.41■□□□□ 0.06
SNX6-210ENST00000557341 DTWD2Q8NBA8 298 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 TSPAN18Q96SJ8 248 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 FIZ1Q96SL8 496 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 MSTO1Q9BUK6 570 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 RPP25Q9BUL9 199 aaKnown RBP15.41■□□□□ 0.06
SNX6-210ENST00000557341 STK17AQ9UEE5 414 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 CCDC39Q9UFE4 941 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 AFF4Q9UHB7 1163 aaKnown RBP15.41■□□□□ 0.06
SNX6-210ENST00000557341 CLIC4Q9Y696 253 aa15.41■□□□□ 0.06
SNX6-210ENST00000557341 KIF26AQ9ULI4 1882 aaPredicted RBP15.4■□□□□ 0.06
SNX6-210ENST00000557341 A0A0B4J269 797 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 LACTBL1A8MY62 500 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 PTPN2P17706 415 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 AARSP49588 968 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNX6-210ENST00000557341 GPC5P78333 572 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 GTF2BQ00403 316 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 PFKPQ01813 784 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 ADCY1Q08828 1119 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 RESTQ13127 1097 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 PTPAQ15257 358 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 ANGPT1Q15389 498 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 CD302Q8IX05 232 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 ELMOD1Q8N336 334 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 SHDQ96IW2 340 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 EPSTI1Q96J88 318 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 KXD1Q9BQD3 176 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 CORO1BQ9BR76 489 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 OXCT2Q9BYC2 517 aaPredicted RBP15.4■□□□□ 0.06
SNX6-210ENST00000557341 GDE1Q9NZC3 331 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 FBXO2Q9UK22 296 aaPredicted RBP15.4■□□□□ 0.06
SNX6-210ENST00000557341 MAFFQ9ULX9 164 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 FRYLO94915 3013 aa15.4■□□□□ 0.06
SNX6-210ENST00000557341 ZNF197O14709 1029 aa15.39■□□□□ 0.05
SNX6-210ENST00000557341 SEC24AO95486 1093 aa15.39■□□□□ 0.05
SNX6-210ENST00000557341 ADRB2P07550 413 aa15.39■□□□□ 0.05
SNX6-210ENST00000557341 CEBPBP17676 345 aa15.39■□□□□ 0.05
SNX6-210ENST00000557341 SYT1P21579 422 aa15.39■□□□□ 0.05
SNX6-210ENST00000557341 NMT1P30419 496 aaKnown RBP15.39■□□□□ 0.05
SNX6-210ENST00000557341 DDIT3P35638 169 aa15.39■□□□□ 0.05
SNX6-210ENST00000557341 PRSS36Q5K4E3 855 aa15.39■□□□□ 0.05
SNX6-210ENST00000557341 SPECC1Q5M775 1068 aa15.39■□□□□ 0.05
SNX6-210ENST00000557341 SLC39A4Q6P5W5 647 aa15.39■□□□□ 0.05
SNX6-210ENST00000557341 USP49Q70CQ1 688 aa15.39■□□□□ 0.05
SNX6-210ENST00000557341 PDZD4Q76G19 769 aaPredicted RBP15.39■□□□□ 0.05
SNX6-210ENST00000557341 USP37Q86T82 979 aa15.39■□□□□ 0.05
SNX6-210ENST00000557341 TMEM130Q8N3G9 435 aa15.39■□□□□ 0.05
SNX6-210ENST00000557341 BEST2Q8NFU1 509 aa15.39■□□□□ 0.05
SNX6-210ENST00000557341 PJA1Q8NG27 643 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms