RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PRIM2P49643 509 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 ATP12AP54707 1039 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 KDSRQ06136 332 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 PYHIN1Q6K0P9 492 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 B3GALT6Q96L58 329 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 CLASP1Q7Z460 1538 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 ZW10O43264 779 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 BCAR1P56945 870 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 ACTR2P61160 394 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 TGM3Q08188 693 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 PRR23BQ6ZRT6 265 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 S100A13Q99584 98 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 PNMA3Q9UL41 463 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 RPN2P04844 631 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 C18orf25Q96B23 403 aaPredicted RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 TMA16Q96EY4 203 aaKnown RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 VTA1Q9NP79 307 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 K7ERI5 159 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 GCLCP48506 637 aaPredicted RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 SUGP1Q8IWZ8 645 aaKnown RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 HPS3Q969F9 1004 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 ING4Q9UNL4 249 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 BTBD3Q9Y2F9 522 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 TCP11X1B4DZS4 312 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 TRAP1Q12931 704 aaKnown RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 STILQ15468 1287 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 FAM83EQ2M2I3 478 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 CERKLQ49MI3 558 aaPredicted RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 C12orf60Q5U649 245 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 HDHD2Q9H0R4 259 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 SNX9Q9Y5X1 595 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 NPATQ14207 1427 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 LDOC1O95751 146 aaPredicted RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 CXCR5P32302 372 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 PTGES3Q15185 160 aaKnown RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 ZNF699Q32M78 642 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 NUP93Q8N1F7 819 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 STARD8Q92502 1023 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 CLCC1Q96S66 551 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 ENO4A6NNW6 628 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 FAM220BPB1ANY3 271 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 PI4K2BG5E9Z4 385 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 CCDC137Q6PK04 289 aaKnown RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 SLCO1B7G3V0H7 640 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 SEC31AO94979 1220 aaKnown RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 SMCO1Q147U7 214 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 AASDHPPTQ9NRN7 309 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 WDR35Q9P2L0 1181 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 ARAP1Q96P48 1450 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 ZBTB39O15060 712 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 PPM1NQ8N819 430 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 STK32BQ9NY57 414 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 DLGAP2Q9P1A6 1054 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 RAD54BQ9Y620 910 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 POLBP06746 335 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 PABPC1P11940 636 aaKnown RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 SPRP35270 261 aaPredicted RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 MDH1P40925 334 aaKnown RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 ARL4DP49703 201 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 TTLL9Q3SXZ7 439 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 SKAP2O75563 359 aaPredicted RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 PHKA2P46019 1235 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 ITIH4Q14624 930 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 ATL2Q8NHH9 583 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 NGRNQ9NPE2 291 aaKnown RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 O00370 1275 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 FKBP6O75344 327 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 FTCDO95954 541 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 ENO1P06733 434 aaKnown RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 NRG3P56975 720 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 OLR1P78380 273 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 DMPKQ09013 629 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 KRT31Q15323 416 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 OR6B2Q6IFH4 312 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 CCDC185Q8N715 623 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 CYFIP2Q96F07 1278 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 FRMD8P1Q9BZ68 369 aaPredicted RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 ABHD10Q9NUJ1 306 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 UBP1Q9NZI7 540 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 GRID1Q9ULK0 1009 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 G3BP2Q9UN86 482 aaKnown RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 KCNJ14Q9UNX9 436 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 USP19O94966 1318 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 ACLYP53396 1101 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 BTN3A2P78410 334 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 MFSD14BQ5SR56 506 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 NT5DC4Q86YG4 428 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 S100ZQ8WXG8 99 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 TRABDQ9H4I3 376 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 TMEM51Q9NW97 253 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 C3orf70A6NLC5 250 aaPredicted RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 MGRN1O60291 552 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 APOC1P02654 83 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 CRKP46108 304 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 PLOD1Q02809 727 aaPredicted RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 TTC39BQ5VTQ0 682 aaPredicted RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 MZT2AQ6P582 158 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 ECE2O60344 883 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms