RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 CEP72Q9P209 647 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 NUB1Q9Y5A7 615 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 NOTCH4Q99466 2003 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 MIA3Q5JRA6 1907 aa13.49□□□□□ -0.25
SNX6-209ENST00000557265 SLC30A4O14863 429 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 HRO43593 1189 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 JAK2O60674 1132 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 MOSPD3O75425 235 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 MYL4P12829 197 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 CCNE1P24864 410 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 DMWDQ09019 674 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 SIM2Q14190 667 aaPredicted RBP13.48□□□□□ -0.25
SNX6-209ENST00000557265 GAS6Q14393 721 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 ZNF174Q15697 407 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 ECM1Q16610 540 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 ME3Q16798 604 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 ZNF568Q3ZCX4 644 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 PPM1JQ5JR12 505 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 NSUN7Q8NE18 718 aaKnown RBP13.48□□□□□ -0.25
SNX6-209ENST00000557265 ZSCAN18Q8TBC5 510 aaPredicted RBP13.48□□□□□ -0.25
SNX6-209ENST00000557265 DEPDC1BQ8WUY9 529 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 KIFAP3Q92845 792 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 C18orf25Q96B23 403 aaPredicted RBP13.48□□□□□ -0.25
SNX6-209ENST00000557265 ACO2Q99798 780 aaKnown RBP13.48□□□□□ -0.25
SNX6-209ENST00000557265 BHMT2Q9H2M3 363 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 TRPV4Q9HBA0 871 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 PTPRHQ9HD43 1115 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 SEMA4GQ9NTN9 838 aa13.48□□□□□ -0.25
SNX6-209ENST00000557265 AFF4Q9UHB7 1163 aaKnown RBP13.48□□□□□ -0.25
SNX6-209ENST00000557265 VWA8A3KMH1 1905 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 CCDC169A6NNP5 214 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 HEPACAM2A8MVW5 462 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 CHURC1-FNTBB4DL54 471 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 LRP3O75074 770 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 LARGE1O95461 756 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 RPL9P32969 192 aaKnown RBP13.47□□□□□ -0.25
SNX6-209ENST00000557265 NPTX2P47972 431 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 FNTBP49356 437 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 SRSF5Q13243 272 aaKnown RBP13.47□□□□□ -0.25
SNX6-209ENST00000557265 TEAD2Q15562 447 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 ST3GAL2Q16842 350 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 MFSD6LQ8IWD5 586 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 SPEM1Q8N4L4 309 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 GTF3C6Q969F1 213 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 ACAP3Q96P50 834 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 SLITRK6Q9H5Y7 841 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 ASAH2Q9NR71 780 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 PATJQ8NI35 1801 aa13.47□□□□□ -0.25
SNX6-209ENST00000557265 NCANO14594 1321 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 ARNTLO00327 626 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 GDF9O60383 454 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 OR52Z1P0C646 297 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 MCF2P10911 925 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 KCNE1P15382 129 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 MUTP22033 750 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 MCM4P33991 863 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 CCT6AP40227 531 aaKnown RBP13.46□□□□□ -0.25
SNX6-209ENST00000557265 KPNA1P52294 538 aaPredicted RBP13.46□□□□□ -0.25
SNX6-209ENST00000557265 EPHA5P54756 1037 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 PEX3P56589 373 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 PTGDRQ13258 359 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 CSRP2Q16527 193 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 ZNF280DQ6N043 979 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 RNF19BQ6ZMZ0 732 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 PRR23CQ6ZRP0 262 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 YAF2Q8IY57 180 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 LEMD2Q8NC56 503 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 APPL2Q8NEU8 664 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 SHKBP1Q8TBC3 707 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 CSGALNACT1Q8TDX6 532 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 SUSD3Q96L08 255 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 TBC1D32Q96NH3 1257 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 TCHPQ9BT92 498 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 TARS2Q9BW92 718 aaKnown RBP13.46□□□□□ -0.25
SNX6-209ENST00000557265 MRPL4Q9BYD3 311 aaKnown RBP13.46□□□□□ -0.25
SNX6-209ENST00000557265 RBM12Q9NTZ6 932 aaKnown RBP13.46□□□□□ -0.25
SNX6-209ENST00000557265 CNTN3Q9P232 1028 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 MAFFQ9ULX9 164 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 KIAA1024Q9UPX6 916 aa13.46□□□□□ -0.25
SNX6-209ENST00000557265 PHLPP2Q6ZVD8 1323 aa13.45□□□□□ -0.26
SNX6-209ENST00000557265 MAP1BP46821 2468 aaKnown RBP13.45□□□□□ -0.26
SNX6-209ENST00000557265 SLC38A8A6NNN8 435 aa13.45□□□□□ -0.26
SNX6-209ENST00000557265 MEFVO15553 781 aaPredicted RBP13.45□□□□□ -0.26
SNX6-209ENST00000557265 HARSP12081 509 aaKnown RBP13.45□□□□□ -0.26
SNX6-209ENST00000557265 CPB1P15086 417 aa13.45□□□□□ -0.26
SNX6-209ENST00000557265 MARCKSP29966 332 aaPredicted RBP13.45□□□□□ -0.26
SNX6-209ENST00000557265 CNR2P34972 360 aa13.45□□□□□ -0.26
SNX6-209ENST00000557265 SOX9P48436 509 aa13.45□□□□□ -0.26
SNX6-209ENST00000557265 MLLT6P55198 1093 aaPredicted RBP13.45□□□□□ -0.26
SNX6-209ENST00000557265 GUCY1B3Q02153 619 aa13.45□□□□□ -0.26
SNX6-209ENST00000557265 LRRC32Q14392 662 aa13.45□□□□□ -0.26
SNX6-209ENST00000557265 SAFBQ15424 915 aaKnown RBP eCLIP13.45□□□□□ -0.26
SNX6-209ENST00000557265 HAUS3Q68CZ6 603 aa13.45□□□□□ -0.26
SNX6-209ENST00000557265 HEATR6Q6AI08 1181 aaKnown RBP13.45□□□□□ -0.26
SNX6-209ENST00000557265 TAS1R3Q7RTX0 852 aa13.45□□□□□ -0.26
SNX6-209ENST00000557265 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.45□□□□□ -0.26
SNX6-209ENST00000557265 LONP2Q86WA8 852 aa13.45□□□□□ -0.26
SNX6-209ENST00000557265 GPIHBP1Q8IV16 184 aa13.45□□□□□ -0.26
SNX6-209ENST00000557265 DDX12PQ92771 950 aa13.45□□□□□ -0.26
SNX6-209ENST00000557265 E2F7Q96AV8 911 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms