RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 REEP2Q9BRK0 252 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 DLGAP2Q9P1A6 1054 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 MAFFQ9ULX9 164 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 PCDHB8Q9UN66 801 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 DMDP11532 3685 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 ECI2O75521 394 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 CYP3A5P20815 502 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 LRPAP1P30533 357 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 LONP1P36776 959 aaKnown RBP17.31■□□□□ 0.36
TUBB3-213ENST00000557262 LIG4P49917 911 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 PRKCQQ04759 706 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 SPAG1Q07617 926 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 SLC5A9Q2M3M2 681 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 BRAPQ7Z569 592 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 TSPAN18Q96SJ8 248 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 CORO1BQ9BR76 489 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 BLOC1S4Q9NUP1 217 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 TUBGCP4Q9UGJ1 667 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 AFF4Q9UHB7 1163 aaKnown RBP17.31■□□□□ 0.36
TUBB3-213ENST00000557262 TBX20Q9UMR3 447 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 UBQLN1Q9UMX0 589 aaKnown RBP17.31■□□□□ 0.36
TUBB3-213ENST00000557262 CITO14578 2027 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 NOTCH4Q99466 2003 aa17.31■□□□□ 0.36
TUBB3-213ENST00000557262 RIF1Q5UIP0 2472 aaKnown RBP17.3■□□□□ 0.36
TUBB3-213ENST00000557262 MYH11P35749 1972 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 KANSL1LA0AUZ9 987 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 LACTBL1A8MY62 500 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 M0QZQ0 153 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 ZNF197O14709 1029 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 TRAK2O60296 914 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 MICAL2O94851 1124 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 FAM13AO94988 1023 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 TNFSF9P41273 254 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 ZNF131P52739 623 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 ADCY1Q08828 1119 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 MLF2Q15773 248 aaPredicted RBP17.3■□□□□ 0.36
TUBB3-213ENST00000557262 C1orf210Q8IVY1 113 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 ELMOD1Q8N336 334 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 PJA1Q8NG27 643 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 KIF12Q96FN5 646 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 ZNF512Q96ME7 567 aaPredicted RBP17.3■□□□□ 0.36
TUBB3-213ENST00000557262 DDX23Q9BUQ8 820 aaKnown RBP17.3■□□□□ 0.36
TUBB3-213ENST00000557262 FOXQ1Q9C009 403 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 SEMA4AQ9H3S1 761 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 PARVGQ9HBI0 331 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 INSL5Q9Y5Q6 135 aa17.3■□□□□ 0.36
TUBB3-213ENST00000557262 OGTO15294 1046 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 XPOTO43592 962 aaKnown RBP17.29■□□□□ 0.36
TUBB3-213ENST00000557262 OAZ2O95190 189 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 PIGRP01833 764 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 KRT18P05783 430 aaKnown RBP17.29■□□□□ 0.36
TUBB3-213ENST00000557262 ADRB2P07550 413 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 YWHAHQ04917 246 aaPredicted RBP17.29■□□□□ 0.36
TUBB3-213ENST00000557262 PPP2R3AQ06190 1150 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 MCM6Q14566 821 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 SF3A1Q15459 793 aaKnown RBP17.29■□□□□ 0.36
TUBB3-213ENST00000557262 PRSS36Q5K4E3 855 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 CYP4A22Q5TCH4 519 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 IQCEQ6IPM2 695 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 POTEHQ6S545 545 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 RASSF8Q8NHQ8 419 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 LRRC15Q8TF66 581 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 RAD54LQ92698 747 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 OXCT2Q9BYC2 517 aaPredicted RBP17.29■□□□□ 0.36
TUBB3-213ENST00000557262 OSBPL6Q9BZF3 934 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 PLA2G2FQ9BZM2 168 aa17.29■□□□□ 0.36
TUBB3-213ENST00000557262 RPF1Q9H9Y2 349 aaKnown RBP17.29■□□□□ 0.36
TUBB3-213ENST00000557262 FAM186AA6NE01 2351 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 MYH15Q9Y2K3 1946 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 K7ENM7 598 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 HNRNPDLO14979 420 aaKnown RBP17.28■□□□□ 0.36
TUBB3-213ENST00000557262 CPB1P15086 417 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 GLULP15104 373 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 CEBPBP17676 345 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 PLCG1P19174 1290 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 ABCD1P33897 745 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 DDIT3P35638 169 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 AARSP49588 968 aaKnown RBP eCLIP17.28■□□□□ 0.36
TUBB3-213ENST00000557262 GRIN1Q05586 938 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 KARSQ15046 597 aaKnown RBP17.28■□□□□ 0.36
TUBB3-213ENST00000557262 ENOX2Q16206 610 aaKnown RBP17.28■□□□□ 0.36
TUBB3-213ENST00000557262 TANGO2Q6ICL3 276 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 RNF19BQ6ZMZ0 732 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 PDZD4Q76G19 769 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-213ENST00000557262 CD302Q8IX05 232 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 ADSSL1Q8N142 457 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 TMEM130Q8N3G9 435 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 ELSPBP1Q96BH3 223 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 TCEAL4Q96EI5 215 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 NELL2Q99435 816 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 ZHX3Q9H4I2 956 aa17.28■□□□□ 0.36
TUBB3-213ENST00000557262 TIMM13Q9Y5L4 95 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-213ENST00000557262 A0A0B4J269 797 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 FAM170BA6NMN3 283 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 FAM189A1O60320 539 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 LRRN2O75325 713 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 SP9P0CG40 484 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 GTF2BQ00403 316 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 TWF1Q12792 350 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 ZBTB41Q5SVQ8 909 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms