RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 TAF1BQ53T94 588 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 PRSS55Q6UWB4 352 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 PDZD4Q76G19 769 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 TRMT1LQ7Z2T5 733 aaKnown RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 CEP57Q86XR8 500 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 SYT12Q8IV01 421 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 CCDC60Q8IWA6 550 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 LINC01465Q8N7H1 131 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 FAM181AQ8N9Y4 354 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 CEP76Q8TAP6 659 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 EXOC4Q96A65 974 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 TMEM209Q96SK2 561 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 SPOCK3Q9BQ16 436 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 CHMP4BQ9H444 224 aaKnown RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 LY9Q9HBG7 655 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 EVA1BQ9NVM1 165 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 KIAA1522Q9P206 1035 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 TCEAL9Q9UHQ7 104 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 MAFBQ9Y5Q3 323 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 DENND4AQ7Z401 1863 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 SPTAN1Q13813 2472 aaKnown RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 TEX15Q9BXT5 2789 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 KIAA1671Q9BY89 1806 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 WDR27A2RRH5 827 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 TRABD2BA6NFA1 517 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 ARL5CA6NH57 179 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 HEPACAM2A8MVW5 462 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 E9PAM4 449 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 ERVH48-1M5A8F1 160 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 TNFRSF10BO14763 440 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 SMARCA5O60264 1052 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-245ENST00000556958 F12P00748 615 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-245ENST00000556958 PSAPP07602 524 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 ATP4AP20648 1035 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 HOXD12P35452 270 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 VIPR2P41587 438 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 SOX9P48436 509 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 DGKEP52429 567 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 MARSP56192 900 aaKnown RBP6.43□□□□□ -1.38
ATXN3-245ENST00000556958 AMPD2Q01433 879 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 KCNH2Q12809 1159 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 ELAVL2Q12926 359 aaKnown RBP6.43□□□□□ -1.38
ATXN3-245ENST00000556958 FBXO43Q4G163 708 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 ARHGAP29Q52LW3 1261 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 CEP55Q53EZ4 464 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 C6orf118Q5T5N4 469 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 IQCEQ6IPM2 695 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 SLC23A3Q6PIS1 610 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 TXNDC11Q6PKC3 985 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-245ENST00000556958 TOGARAM2Q6ZUX3 1019 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 LPCAT2Q7L5N7 544 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 TMPRSS7Q7RTY8 843 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 RABEPKQ7Z6M1 372 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 ZNF410Q86VK4 478 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 SIRT2Q8IXJ6 389 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 HACE1Q8IYU2 909 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 ELMOD1Q8N336 334 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 GALNT15Q8N3T1 639 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 PNPLA1Q8N8W4 532 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 LEMD2Q8NC56 503 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 CCDC26Q8TAB7 109 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 LNX1Q8TBB1 728 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-245ENST00000556958 RRP36Q96EU6 259 aaKnown RBP6.43□□□□□ -1.38
ATXN3-245ENST00000556958 SCARF2Q96GP6 870 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-245ENST00000556958 FCRL3Q96P31 734 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-245ENST00000556958 ARID3AQ99856 593 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 CORO1BQ9BR76 489 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 PI4K2AQ9BTU6 479 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 GTPBP2Q9BX10 602 aaKnown RBP6.43□□□□□ -1.38
ATXN3-245ENST00000556958 AGO4Q9HCK5 861 aaKnown RBP6.43□□□□□ -1.38
ATXN3-245ENST00000556958 ZSWIM5Q9P217 1185 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 SEC63Q9UGP8 760 aaKnown RBP6.43□□□□□ -1.38
ATXN3-245ENST00000556958 PCDHA6Q9UN73 950 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 SLC6A14Q9UN76 642 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 PCDHA8Q9Y5H6 950 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 ZMYM6O95789 1325 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 WDFY3Q8IZQ1 3526 aa6.43□□□□□ -1.38
ATXN3-245ENST00000556958 TEP1Q99973 2627 aaKnown RBP6.43□□□□□ -1.38
ATXN3-245ENST00000556958 ABCA12Q86UK0 2595 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 CACNA1EQ15878 2313 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 A0A087WZ62 844 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 B4E1Z4 1266 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 KRT38O76015 456 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 CCNE2O96020 404 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 CFIP05156 583 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 RLBP1P12271 317 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 OR1D2P34982 312 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 MFAP1P55081 439 aaKnown RBP6.42□□□□□ -1.38
ATXN3-245ENST00000556958 NCBP1Q09161 790 aaKnown RBP6.42□□□□□ -1.38
ATXN3-245ENST00000556958 FCHO2Q0JRZ9 810 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 ITGB3BPQ13352 177 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-245ENST00000556958 DUOXA1Q1HG43 343 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 MCMDC2Q4G0Z9 681 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 WDR44Q5JSH3 913 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 PRSS36Q5K4E3 855 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 COLEC12Q5KU26 742 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 SPDYCQ5MJ68 293 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 RTP2Q5QGT7 225 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 FAM171A1Q5VUB5 890 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms