RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 CHURC1-FNTBB4DL54 471 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 PODXLO00592 558 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 RIOK3O14730 519 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 EPB41L2O43491 1005 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 HRO43593 1189 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 GDF9O60383 454 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 MOSPD3O75425 235 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 CHRNB1P11230 501 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 CCNE1P24864 410 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 MCM7P33993 719 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 FNTBP49356 437 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 EFNA5P52803 228 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 FOSBP53539 338 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 YARSP54577 528 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 OSTNP61366 133 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 GAS6Q14393 721 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 PPP2R5AQ15172 486 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 IQCEQ6IPM2 695 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 PRR23CQ6ZRP0 262 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 DIS3L2Q8IYB7 885 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 ZSCAN18Q8TBC5 510 aaPredicted RBP9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 ZMAT2Q96NC0 199 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 CEP72Q9P209 647 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 FBXL5Q9UKA1 691 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 TICRRQ7Z2Z1 1910 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 CHD6Q8TD26 2715 aa9.91□□□□□ -0.82
HNRNPC-227ENST00000556897 COL4A2P08572 1712 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 H7C4K7 107 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 ARNTLO00327 626 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 ZNF263O14978 683 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 SYN3O14994 580 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 LRP3O75074 770 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 MYL4P12829 197 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 RPA1P27694 616 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 GRM5P41594 1212 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 TWF1Q12792 350 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 MRPL58Q14197 206 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 TEAD2Q15562 447 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 CSRP2Q16527 193 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 ZNF568Q3ZCX4 644 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 CTXN3Q4LDR2 81 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 XKR4Q5GH76 650 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 TPGS2Q68CL5 300 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 HEATR6Q6AI08 1181 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 ALKAL1Q6UXT8 129 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 APBB1IPQ7Z5R6 666 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 ELMOD1Q8N336 334 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 SPEM1Q8N4L4 309 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 NECAB1Q8N987 351 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 DEPDC1BQ8WUY9 529 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 CHAMP1Q96JM3 812 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 IFT74Q96LB3 600 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 ZNF512Q96ME7 567 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 POLR3CQ9BUI4 534 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 CCDC94Q9BW85 323 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 CDT1Q9H211 546 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 ASAH2Q9NR71 780 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 TOPORSQ9NS56 1045 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 RBM12Q9NTZ6 932 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 SLC38A7Q9NVC3 462 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 TNFSF13BQ9Y275 285 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 NUB1Q9Y5A7 615 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 RALGAPA1Q6GYQ0 2036 aa9.9□□□□□ -0.82
HNRNPC-227ENST00000556897 SLC38A8A6NNN8 435 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 HEPACAM2A8MVW5 462 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 K7ERI5 159 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 K7ESF4 209 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 HOXC13P31276 330 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 SOX9P48436 509 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 EPHA5P54756 1037 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 PTGDRQ13258 359 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 Q6ZS52 159 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 GPIHBP1Q8IV16 184 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 MFSD6LQ8IWD5 586 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 LEMD2Q8NC56 503 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 ERMNQ8TAM6 284 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 SHKBP1Q8TBC3 707 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 C18orf25Q96B23 403 aaPredicted RBP9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 RSPRY1Q96DX4 576 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 BHMT2Q9H2M3 363 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 SLITRK6Q9H5Y7 841 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 TRPV4Q9HBA0 871 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 PTPRHQ9HD43 1115 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 C2orf42Q9NWW7 574 aa9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 AFF4Q9UHB7 1163 aaKnown RBP9.89□□□□□ -0.83
HNRNPC-227ENST00000556897 CCDC169A6NNP5 214 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 MEFVO15553 781 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 JAK2O60674 1132 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 LARGE1O95461 756 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 CPB1P15086 417 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 KCNE1P15382 129 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 RPL9P32969 192 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 MCM4P33991 863 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 CNR2P34972 360 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 KPNA1P52294 538 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 TRIM29Q14134 588 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 LRRC32Q14392 662 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 ECM1Q16610 540 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 ME3Q16798 604 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms