RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 ITIH3Q06033 890 aa24.41■■□□□ 1.5
PABPN1-206ENST00000556809 PPP2R3AQ06190 1150 aa24.41■■□□□ 1.5
PABPN1-206ENST00000556809 SPAG1Q07617 926 aa24.41■■□□□ 1.5
PABPN1-206ENST00000556809 PRSS55Q6UWB4 352 aaPredicted RBP24.41■■□□□ 1.5
PABPN1-206ENST00000556809 CRELD2Q6UXH1 353 aaPredicted RBP24.41■■□□□ 1.5
PABPN1-206ENST00000556809 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.41■■□□□ 1.5
PABPN1-206ENST00000556809 SMYD4Q8IYR2 804 aaPredicted RBP24.41■■□□□ 1.5
PABPN1-206ENST00000556809 TMEM130Q8N3G9 435 aa24.41■■□□□ 1.5
PABPN1-206ENST00000556809 GUF1Q8N442 669 aaKnown RBP24.41■■□□□ 1.5
PABPN1-206ENST00000556809 GOLGA5Q8TBA6 731 aa24.41■■□□□ 1.5
PABPN1-206ENST00000556809 SAAL1Q96ER3 474 aa24.41■■□□□ 1.5
PABPN1-206ENST00000556809 TSPAN18Q96SJ8 248 aa24.41■■□□□ 1.5
PABPN1-206ENST00000556809 GTPBP4Q9BZE4 634 aaKnown RBP24.41■■□□□ 1.5
PABPN1-206ENST00000556809 KCTD10Q9H3F6 313 aa24.41■■□□□ 1.5
PABPN1-206ENST00000556809 PCIF1Q9H4Z3 704 aa24.41■■□□□ 1.5
PABPN1-206ENST00000556809 CDH22Q9UJ99 828 aa24.41■■□□□ 1.5
PABPN1-206ENST00000556809 MAN1B1Q9UKM7 699 aa24.41■■□□□ 1.5
PABPN1-206ENST00000556809 LDHAP00338 332 aaKnown RBP24.4■■□□□ 1.5
PABPN1-206ENST00000556809 RPL17P18621 184 aaKnown RBP24.4■■□□□ 1.5
PABPN1-206ENST00000556809 CYP3A5P20815 502 aa24.4■■□□□ 1.5
PABPN1-206ENST00000556809 BRCC3P46736 316 aa24.4■■□□□ 1.5
PABPN1-206ENST00000556809 POU5F1Q01860 360 aaKnown RBP24.4■■□□□ 1.5
PABPN1-206ENST00000556809 CREMQ03060 361 aa24.4■■□□□ 1.5
PABPN1-206ENST00000556809 CBX2Q14781 532 aaPredicted RBP24.4■■□□□ 1.5
PABPN1-206ENST00000556809 LILRA6Q6PI73 481 aa24.4■■□□□ 1.5
PABPN1-206ENST00000556809 C12orf76Q8N812 135 aaPredicted RBP24.4■■□□□ 1.5
PABPN1-206ENST00000556809 FEZF2Q8TBJ5 459 aa24.4■■□□□ 1.5
PABPN1-206ENST00000556809 KHSRPQ92945 711 aaKnown RBP eCLIP24.4■■□□□ 1.52e-8■□□□□ 10.7
PABPN1-206ENST00000556809 CLSTN3Q9BQT9 956 aa24.4■■□□□ 1.5
PABPN1-206ENST00000556809 FAM213AQ9BRX8 229 aa24.4■■□□□ 1.5
PABPN1-206ENST00000556809 HSPBP1Q9NZL4 362 aa24.4■■□□□ 1.5
PABPN1-206ENST00000556809 CLIC2O15247 247 aa24.39■■□□□ 1.49
PABPN1-206ENST00000556809 EXTL3O43909 919 aa24.39■■□□□ 1.49
PABPN1-206ENST00000556809 LRPAP1P30533 357 aa24.39■■□□□ 1.49
PABPN1-206ENST00000556809 MCM4P33991 863 aa24.39■■□□□ 1.49
PABPN1-206ENST00000556809 CEP57Q86XR8 500 aa24.39■■□□□ 1.49
PABPN1-206ENST00000556809 CD302Q8IX05 232 aa24.39■■□□□ 1.49
PABPN1-206ENST00000556809 C12orf56Q8IXR9 622 aa24.39■■□□□ 1.49
PABPN1-206ENST00000556809 GPD1LQ8N335 351 aa24.39■■□□□ 1.49
PABPN1-206ENST00000556809 ZSWIM2Q8NEG5 633 aa24.39■■□□□ 1.49
PABPN1-206ENST00000556809 KIF12Q96FN5 646 aa24.39■■□□□ 1.49
PABPN1-206ENST00000556809 PHF7Q9BWX1 381 aaPredicted RBP24.39■■□□□ 1.49
PABPN1-206ENST00000556809 NUP62CLQ9H1M0 184 aa24.39■■□□□ 1.49
PABPN1-206ENST00000556809 UBQLN1Q9UMX0 589 aaKnown RBP24.39■■□□□ 1.49
PABPN1-206ENST00000556809 C2orf16Q68DN1 1984 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 GOLGA8IPA6NC78 632 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 GOLGA8JA6NMD2 632 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 LOC730098B7Z3J9 87 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 I3L4J1 428 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 PDXKO00764 312 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 TGM5O43548 720 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 TRAPPC3O43617 180 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 PAPLNO95428 1278 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 MBD3O95983 291 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 GLUD1P00367 558 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 TKTP29401 623 aaKnown RBP24.38■■□□□ 1.49
PABPN1-206ENST00000556809 PSMD5Q16401 504 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 COBLL1Q53SF7 1204 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 RARS2Q5T160 578 aaKnown RBP24.38■■□□□ 1.49
PABPN1-206ENST00000556809 ISM2Q6H9L7 571 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 NOC3LQ8WTT2 800 aaKnown RBP24.38■■□□□ 1.49
PABPN1-206ENST00000556809 HDAC7Q8WUI4 952 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 POP1Q99575 1024 aaKnown RBP24.38■■□□□ 1.49
PABPN1-206ENST00000556809 SFXN1Q9H9B4 322 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 MAN1C1Q9NR34 630 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 KIAA1468Q9P260 1216 aa24.38■■□□□ 1.49
PABPN1-206ENST00000556809 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.38■■□□□ 1.49
PABPN1-206ENST00000556809 BIN1O00499 593 aa24.37■■□□□ 1.49
PABPN1-206ENST00000556809 SSTR3P32745 418 aaPredicted RBP24.37■■□□□ 1.49
PABPN1-206ENST00000556809 PRCPP42785 496 aa24.37■■□□□ 1.49
PABPN1-206ENST00000556809 CYP2J2P51589 502 aa24.37■■□□□ 1.49
PABPN1-206ENST00000556809 SPATA1Q5VX52 437 aa24.37■■□□□ 1.49
PABPN1-206ENST00000556809 JADE1Q6IE81 842 aa24.37■■□□□ 1.49
PABPN1-206ENST00000556809 CES5AQ6NT32 575 aa24.37■■□□□ 1.49
PABPN1-206ENST00000556809 PDXDC1Q6P996 788 aa24.37■■□□□ 1.49
PABPN1-206ENST00000556809 PALB2Q86YC2 1186 aa24.37■■□□□ 1.49
PABPN1-206ENST00000556809 FAM212AQ96EL1 285 aa24.37■■□□□ 1.49
PABPN1-206ENST00000556809 ASB7Q9H672 318 aa24.37■■□□□ 1.49
PABPN1-206ENST00000556809 MTRRQ9UBK8 725 aa24.37■■□□□ 1.49
PABPN1-206ENST00000556809 DERAQ9Y315 318 aa24.37■■□□□ 1.49
PABPN1-206ENST00000556809 DENND4AQ7Z401 1863 aa24.36■■□□□ 1.49
PABPN1-206ENST00000556809 ADAM12O43184 909 aa24.36■■□□□ 1.49
PABPN1-206ENST00000556809 CALUO43852 315 aaPredicted RBP24.36■■□□□ 1.49
PABPN1-206ENST00000556809 MORC3Q14149 939 aa24.36■■□□□ 1.49
PABPN1-206ENST00000556809 GPR149Q86SP6 731 aa24.36■■□□□ 1.49
PABPN1-206ENST00000556809 GLYCTKQ8IVS8 523 aa24.36■■□□□ 1.49
PABPN1-206ENST00000556809 BRSK2Q8IWQ3 736 aa24.36■■□□□ 1.49
PABPN1-206ENST00000556809 XXYLT1Q8NBI6 393 aa24.36■■□□□ 1.49
PABPN1-206ENST00000556809 SUSD3Q96L08 255 aa24.36■■□□□ 1.49
PABPN1-206ENST00000556809 KIAA1586Q9HCI6 787 aa24.36■■□□□ 1.49
PABPN1-206ENST00000556809 RBAKQ9NYW8 714 aaPredicted RBP24.36■■□□□ 1.49
PABPN1-206ENST00000556809 TRAF3IP3Q9Y228 551 aa24.36■■□□□ 1.49
PABPN1-206ENST00000556809 SYN3O14994 580 aa24.35■■□□□ 1.49
PABPN1-206ENST00000556809 IL18RAPO95256 599 aa24.35■■□□□ 1.49
PABPN1-206ENST00000556809 NFICP08651 508 aa24.35■■□□□ 1.49
PABPN1-206ENST00000556809 WEE2P0C1S8 567 aa24.35■■□□□ 1.49
PABPN1-206ENST00000556809 SPATA31D3P0C874 917 aa24.35■■□□□ 1.49
PABPN1-206ENST00000556809 GUCY2FP51841 1108 aa24.35■■□□□ 1.49
PABPN1-206ENST00000556809 RSPO2Q6UXX9 243 aaPredicted RBP24.35■■□□□ 1.49
PABPN1-206ENST00000556809 TMC5Q6UXY8 1006 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms