RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 ARMCX5Q6P1M9 558 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 EPM2AIP1Q7L775 607 aaPredicted RBP11.26□□□□□ -0.61
SNX6-208ENST00000556712 BRSK2Q8IWQ3 736 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 POP1Q99575 1024 aaKnown RBP11.26□□□□□ -0.61
SNX6-208ENST00000556712 PYM1Q9BRP8 204 aaKnown RBP11.26□□□□□ -0.61
SNX6-208ENST00000556712 EPHX3Q9H6B9 360 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 TMEM206Q9H813 350 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 TSHZ2Q9NRE2 1034 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 NCOR1O75376 2440 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 BDP1A6H8Y1 2624 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 FAM237AA0A1B0GTK4 181 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 FAM86C2PA6NEL3 165 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 C2CD4DB7Z1M9 353 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 EIF3DO15371 548 aaKnown RBP eCLIP11.25□□□□□ -0.61
SNX6-208ENST00000556712 XPOTO43592 962 aaKnown RBP11.25□□□□□ -0.61
SNX6-208ENST00000556712 CYP3A5P20815 502 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 GARTP22102 1010 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 NUCB2P80303 420 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 POSTNQ15063 836 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 KMT5BQ4FZB7 885 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 LMBRD2Q68DH5 695 aaPredicted RBP11.25□□□□□ -0.61
SNX6-208ENST00000556712 SCARA3Q6AZY7 606 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 LILRA6Q6PI73 481 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 STXBP4Q6ZWJ1 553 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 GPR149Q86SP6 731 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 GPR65Q8IYL9 337 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 KREMEN2Q8NCW0 462 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 BEST2Q8NFU1 509 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 SCFD1Q8WVM8 642 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 SUSD3Q96L08 255 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 RIPOR3Q96MK2 946 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 EXOC1Q9NV70 894 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 RBAKQ9NYW8 714 aaPredicted RBP11.25□□□□□ -0.61
SNX6-208ENST00000556712 MUTYHQ9UIF7 546 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 FBXW11Q9UKB1 542 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 TIMM13Q9Y5L4 95 aaPredicted RBP11.25□□□□□ -0.61
SNX6-208ENST00000556712 UBE4BO95155 1302 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 DOCK6Q96HP0 2047 aa11.25□□□□□ -0.61
SNX6-208ENST00000556712 CCDC195A0A1B0GUA6 201 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 A0A1W2PQ27 194 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 A0A1W2PQ64 194 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 A0A1W2PQD8 194 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 WDR27A2RRH5 827 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 SYN3O14994 580 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 CLIC2O15247 247 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 SPTLC1O15269 473 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 TGFB1I1O43294 461 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 EXTL3O43909 919 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 IL18RAPO95256 599 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 MTHFRP42898 656 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 ARPP19P56211 112 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 ROR1Q01973 937 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 C9orf57Q5W0N0 161 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 PDXDC1Q6P996 788 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 KRBA2Q6ZNG9 492 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 ANKS3Q6ZW76 656 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 RNF135Q8IUD6 432 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 CBWD2Q8IUF1 395 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 CD302Q8IX05 232 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 GPD1LQ8N335 351 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 KIAA0895Q8NCT3 520 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 ZNF507Q8TCN5 953 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 SMG7Q92540 1137 aaKnown RBP11.24□□□□□ -0.61
SNX6-208ENST00000556712 ZNF707Q96C28 371 aaPredicted RBP11.24□□□□□ -0.61
SNX6-208ENST00000556712 NECTIN4Q96NY8 510 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 ASB7Q9H672 318 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 AGPAT3Q9NRZ7 376 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 HSPBP1Q9NZL4 362 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 FBXL5Q9UKA1 691 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 PCDHB8Q9UN66 801 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 DERAQ9Y315 318 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 C2CD2Q9Y426 696 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 PTPRJQ12913 1337 aa11.24□□□□□ -0.61
SNX6-208ENST00000556712 PVALEFA0A1B0GWK0 134 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 ANO9A1A5B4 782 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 M0QZQ0 153 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 ZMYND10O75800 440 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 ZNF202O95125 648 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 RPN1P04843 607 aaKnown RBP11.23□□□□□ -0.61
SNX6-208ENST00000556712 C8AP07357 584 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 OR4Q2P0C623 313 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 AARSP49588 968 aaKnown RBP eCLIP11.23□□□□□ -0.61
SNX6-208ENST00000556712 CYP2J2P51589 502 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 TFAMQ00059 246 aaKnown RBP11.23□□□□□ -0.61
SNX6-208ENST00000556712 STK4Q13043 487 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 RAB33AQ14088 237 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 BMT2Q1RMZ1 405 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 CTXN3Q4LDR2 81 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 ATAT1Q5SQI0 421 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 LIN9Q5TKA1 542 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 ZNF280DQ6N043 979 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 DSTYKQ6XUX3 929 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 TDRD5Q8NAT2 981 aaKnown RBP11.23□□□□□ -0.61
SNX6-208ENST00000556712 SLC7A14Q8TBB6 771 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 MTMR12Q9C0I1 747 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 PDE11AQ9HCR9 933 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 DPP3Q9NY33 737 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 USP25Q9UHP3 1055 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 BACE2Q9Y5Z0 518 aa11.23□□□□□ -0.61
SNX6-208ENST00000556712 PIRO00625 290 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms