RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 FAM13BQ9NYF5 915 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 KCNH3Q9ULD8 1083 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 UBQLN1Q9UMX0 589 aaKnown RBP8.81□□□□□ -1
VTI1B-206ENST00000556461 NUB1Q9Y5A7 615 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 PCDHB13Q9Y5F0 798 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 TIMM13Q9Y5L4 95 aaPredicted RBP8.81□□□□□ -1
VTI1B-206ENST00000556461 BACE2Q9Y5Z0 518 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 PDCD11Q14690 1871 aaKnown RBP8.81□□□□□ -1
VTI1B-206ENST00000556461 WDR27A2RRH5 827 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 M0QZQ0 153 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 SYN3O14994 580 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 CCL16O15467 120 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 TRAPPC3O43617 180 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 KLRC4O43908 158 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 ZMYND10O75800 440 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 C1RP00736 705 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 C8AP07357 584 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 CYP3A5P20815 502 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 CMA1P23946 247 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 ABCD1P33897 745 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 ARPP19P56211 112 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 KRT85P78386 507 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 ZXDAP98168 799 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 ROR1Q01973 937 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 TMEM132DQ14C87 1099 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 KYAT1Q16773 422 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 TMEM31Q5JXX7 168 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 FAM26FQ5R3K3 315 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 C9orf57Q5W0N0 161 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 C15orf39Q6ZRI6 1047 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 ANKS3Q6ZW76 656 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 UNC13DQ70J99 1090 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 SYCP3Q8IZU3 236 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 ST13P5Q8NFI4 369 aaPredicted RBP8.8□□□□□ -1
VTI1B-206ENST00000556461 HDAC7Q8WUI4 952 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 SCFD1Q8WVM8 642 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 PAGE5Q96GU1 130 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 SPATA32Q96LK8 384 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 MYADMQ96S97 322 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 PRKD2Q9BZL6 878 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 GOLPH3LQ9H4A5 285 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 WDR6Q9NNW5 1121 aaKnown RBP8.8□□□□□ -1
VTI1B-206ENST00000556461 ZDHHC7Q9NXF8 308 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 LIMD1Q9UGP4 676 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 FBXL5Q9UKA1 691 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 PCDHB8Q9UN66 801 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 EXOC7Q9UPT5 735 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 HPSEQ9Y251 543 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 NR2E1Q9Y466 385 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 C2orf16Q68DN1 1984 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 ZDBF2Q9HCK1 2354 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 MUC6Q6W4X9 2439 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 DOCK6Q96HP0 2047 aa8.8□□□□□ -1
VTI1B-206ENST00000556461 DENND4AQ7Z401 1863 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 FAM237AA0A1B0GTK4 181 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 ANO9A1A5B4 782 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 TULP1O00294 542 aaPredicted RBP8.79□□□□□ -1
VTI1B-206ENST00000556461 PIRO00625 290 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 TGFB1I1O43294 461 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 ABLIM3O94929 683 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 SEC24AO95486 1093 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 VNN2O95498 520 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 OR4Q2P0C623 313 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 SLFN14P0C7P3 912 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 PRR29P0C7W0 189 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 COL9A1P20849 921 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 GARTP22102 1010 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 NDUFA8P51970 172 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 LILRA4P59901 499 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 AMPD3Q01432 767 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 ALCAMQ13740 583 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 POSTNQ15063 836 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 PTPN21Q16825 1174 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 CTXN3Q4LDR2 81 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 SLC8B1Q6J4K2 584 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 PDXDC1Q6P996 788 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 POTEHQ6S545 545 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 CCDC149Q6ZUS6 474 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 GRASPQ7Z6J2 395 aaPredicted RBP8.79□□□□□ -1
VTI1B-206ENST00000556461 BRSK2Q8IWQ3 736 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 CD302Q8IX05 232 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 NELFCDQ8IXH7 590 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 ZDHHC14Q8IZN3 488 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 TDRD5Q8NAT2 981 aaKnown RBP8.79□□□□□ -1
VTI1B-206ENST00000556461 BEST2Q8NFU1 509 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 SLC7A14Q8TBB6 771 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 ZNF507Q8TCN5 953 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 NOC3LQ8WTT2 800 aaKnown RBP8.79□□□□□ -1
VTI1B-206ENST00000556461 EDAQ92838 391 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 BORCS6Q96GS4 357 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 TMEM209Q96SK2 561 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 RHOBTB2Q9BYZ6 727 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 LRRC27Q9C0I9 530 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 ASB7Q9H672 318 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 MAGEF1Q9HAY2 307 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 SLC39A2Q9NP94 309 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 HCFC1R1Q9NWW0 138 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 DPP3Q9NY33 737 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 USTQ9Y2C2 406 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 DERAQ9Y315 318 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms