RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 SLC39A11Q8N1S5 342 aa15.15■□□□□ 0.02
VIPAS39-208ENST00000556412 KLHL23Q8NBE8 558 aa15.15■□□□□ 0.02
VIPAS39-208ENST00000556412 C3orf58Q8NDZ4 430 aa15.15■□□□□ 0.02
VIPAS39-208ENST00000556412 FBXO22Q8NEZ5 403 aa15.15■□□□□ 0.02
VIPAS39-208ENST00000556412 BCL7CQ8WUZ0 217 aaPredicted RBP15.15■□□□□ 0.02
VIPAS39-208ENST00000556412 LRCH3Q96II8 777 aa15.15■□□□□ 0.02
VIPAS39-208ENST00000556412 TUBGCP2Q9BSJ2 902 aa15.15■□□□□ 0.02
VIPAS39-208ENST00000556412 TMEM8AQ9HCN3 771 aa15.15■□□□□ 0.02
VIPAS39-208ENST00000556412 MARCH5Q9NX47 278 aa15.15■□□□□ 0.02
VIPAS39-208ENST00000556412 SIX4Q9UIU6 781 aa15.15■□□□□ 0.02
VIPAS39-208ENST00000556412 I3L4J1 428 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 FGF18O76093 207 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 AFPP02771 609 aaKnown RBP15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 C4BPAP04003 597 aaKnown RBP15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 TPM2P07951 284 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 ATP1A3P13637 1013 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 ERVK-21P61565 698 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 MYL7Q01449 175 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 ENPEPQ07075 957 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 KCNH2Q12809 1159 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 CBWD6Q4V339 395 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 CBWD3Q5JTY5 395 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 CBWD5Q5RIA9 395 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 KRT39Q6A163 491 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 IGSF21Q96ID5 467 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 ADAM28Q9UKQ2 775 aa15.14■□□□□ 0.01
VIPAS39-208ENST00000556412 CST3P01034 146 aaPredicted RBP15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 GTF2H1P32780 548 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 BRCC3P46736 316 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 FMO5P49326 533 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 KRT17Q04695 432 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 NCOA4Q13772 614 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 KRT31Q15323 416 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 MAN2A1Q16706 1144 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 ZACNQ401N2 412 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 TAS1R2Q8TE23 839 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 ELMO3Q96BJ8 720 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 ZNF560Q96MR9 790 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 SAMD11Q96NU1 681 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 C11orf84Q9BUA3 381 aaPredicted RBP15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 VPS16Q9H269 839 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 HSD3B7Q9H2F3 369 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 ZNF576Q9H609 170 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 ALG13Q9NP73 1137 aaKnown RBP15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 PTPRSQ13332 1948 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 ANO9A1A5B4 782 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 CARNS1A5YM72 827 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 PIRO00625 290 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 ZNF18P17022 549 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 CA8P35219 290 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 TAF6P49848 677 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 MYL6P60660 151 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 MYO1EQ12965 1108 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 HABP4Q5JVS0 413 aaKnown RBP15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 DSTYKQ6XUX3 929 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 HPDLQ96IR7 371 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 PLVAPQ9BX97 442 aa15.13■□□□□ 0.01
VIPAS39-208ENST00000556412 SF3B1O75533 1304 aaKnown RBP eCLIP15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 VNN1O95497 513 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 HLA-DRAP01903 254 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 PNPLA4P41247 253 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 CETN1Q12798 172 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 GPM6BQ13491 265 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 SV2CQ496J9 727 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 VWA3BQ502W6 1294 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 FUT10Q6P4F1 479 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 CEP57Q86XR8 500 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 LRRC52Q8N7C0 313 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 CXorf38Q8TB03 319 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 GDPD5Q8WTR4 605 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 FAM161BQ96MY7 647 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 PI4K2AQ9BTU6 479 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 IMPG2Q9BZV3 1241 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 NDST4Q9H3R1 872 aa15.12■□□□□ 0.01
VIPAS39-208ENST00000556412 RFXAPO00287 272 aa15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 SPTLC1O15269 473 aa15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 TRAPPC3O43617 180 aa15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 N4BP1O75113 896 aaKnown RBP15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 RB1P06400 928 aa15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 LILRA4P59901 499 aa15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 ZNF699Q32M78 642 aa15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 TIGD5Q53EQ6 642 aa15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 ZNF697Q5TEC3 545 aa15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 C15orf39Q6ZRI6 1047 aa15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 CCDC150Q8NCX0 1101 aa15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 FBXL13Q8NEE6 735 aa15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 B3GALT6Q96L58 329 aa15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 GPR62Q9BZJ7 368 aa15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 NXF1Q9UBU9 619 aaKnown RBP15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 PUF60Q9UHX1 559 aaKnown RBP15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 LAMA2P24043 3122 aaKnown RBP15.11■□□□□ 0.01
VIPAS39-208ENST00000556412 EPOPA6NHQ4 379 aa15.1■□□□□ 0.01
VIPAS39-208ENST00000556412 KPNA7A9QM74 516 aa15.1■□□□□ 0.01
VIPAS39-208ENST00000556412 C5orf67F2Z3F1 127 aa15.1■□□□□ 0.01
VIPAS39-208ENST00000556412 TMEM189-UBE2V1I3L0A0 370 aa15.1■□□□□ 0.01
VIPAS39-208ENST00000556412 SERPINC1P01008 464 aa15.1■□□□□ 0.01
VIPAS39-208ENST00000556412 COPB1P53618 953 aaKnown RBP15.1■□□□□ 0.01
VIPAS39-208ENST00000556412 FAM171A1Q5VUB5 890 aa15.1■□□□□ 0.01
VIPAS39-208ENST00000556412 KIAA1841Q6NSI8 718 aa15.1■□□□□ 0.01
VIPAS39-208ENST00000556412 CD300LGQ6UXG3 332 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms