RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 NEDD4P46934 1319 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 UBN2Q6ZU65 1347 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 TRIM75PA6NK02 468 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 AKR1B15C9JRZ8 316 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-241ENST00000556374 AGRPO00253 132 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 ATP8B1O43520 1251 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 SUSD5O60279 629 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 STX10O60499 249 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 DGKIO75912 1065 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 PDE8BO95263 885 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 ITGAVP06756 1048 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 CSF1RP07333 972 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 SNRPB2P08579 225 aaKnown RBP4.91□□□□□ -1.62
ATXN3-241ENST00000556374 INSRRP14616 1297 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 RXRAP19793 462 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 GPTP24298 496 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 ERCC5P28715 1186 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-241ENST00000556374 GFRA1P56159 465 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 GNG11P61952 73 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 CCDC152Q4G0S7 254 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 SHC4Q6S5L8 630 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 CYB5R4Q7L1T6 521 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 EEPD1Q7L9B9 569 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 NLRP10Q86W26 655 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 ZNF227Q86WZ6 799 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 IQCA1Q86XH1 822 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 CNGA4Q8IV77 575 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 DNAJC10Q8IXB1 793 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 MAGEB6Q8N7X4 407 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 CEP112Q8N8E3 955 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 SPATA5Q8NB90 893 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 RASSF8Q8NHQ8 419 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 CCDC12Q8WUD4 166 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-241ENST00000556374 NUP133Q8WUM0 1156 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 STAG1Q8WVM7 1258 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 DVL3Q92997 716 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-241ENST00000556374 CCDC47Q96A33 483 aaKnown RBP4.91□□□□□ -1.62
ATXN3-241ENST00000556374 ANAPC16Q96DE5 110 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 CCDC51Q96ER9 411 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 CLIC6Q96NY7 704 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 CDK5RAP1Q96SZ6 601 aaKnown RBP4.91□□□□□ -1.62
ATXN3-241ENST00000556374 CDC5LQ99459 802 aaKnown RBP4.91□□□□□ -1.62
ATXN3-241ENST00000556374 UTP14AQ9BVJ6 771 aaKnown RBP4.91□□□□□ -1.62
ATXN3-241ENST00000556374 RNF26Q9BY78 433 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-241ENST00000556374 EPB41L1Q9H4G0 881 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 GREM2Q9H772 168 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 LY9Q9HBG7 655 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 PIH1D3Q9NQM4 214 aaKnown RBP4.91□□□□□ -1.62
ATXN3-241ENST00000556374 SAGE1Q9NXZ1 904 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 CWC15Q9P013 229 aaKnown RBP4.91□□□□□ -1.62
ATXN3-241ENST00000556374 LRP2BPQ9P2M1 347 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 MAN1B1Q9UKM7 699 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 PRDM4Q9UKN5 801 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 PPP2R2CQ9Y2T4 447 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 SIT1Q9Y3P8 196 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 NFE2L3Q9Y4A8 694 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 SLC4A4Q9Y6R1 1079 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 MYO5AQ9Y4I1 1855 aaKnown RBP4.91□□□□□ -1.62
ATXN3-241ENST00000556374 MYH2Q9UKX2 1941 aa4.91□□□□□ -1.62
ATXN3-241ENST00000556374 NUP98P52948 1817 aa4.9□□□□□ -1.62
ATXN3-241ENST00000556374 COL4A5P29400 1685 aa4.9□□□□□ -1.62
ATXN3-241ENST00000556374 MKI67P46013 3256 aaKnown RBP4.9□□□□□ -1.62
ATXN3-241ENST00000556374 MYH6P13533 1939 aa4.9□□□□□ -1.62
ATXN3-241ENST00000556374 MYH13Q9UKX3 1938 aa4.9□□□□□ -1.62
ATXN3-241ENST00000556374 ERVV-1B6SEH8 477 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 H0YIN7 160 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 TRAF5O00463 557 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 KRIT1O00522 736 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 NPHP1O15259 732 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 POLR2DO15514 142 aaKnown RBP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 LAMTOR5O43504 91 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 WDHD1O75717 1129 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 IPO7O95373 1038 aaKnown RBP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 SSBP05455 408 aaKnown RBP eCLIP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 TUBBP07437 444 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 PCP11498 1178 aaKnown RBP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 H2AFXP16104 143 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 TNFRSF1AP19438 455 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 MCM3P25205 808 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 TM4SF1P30408 202 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 BCL6P41182 706 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 PHKA1P46020 1223 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 CRKLP46109 303 aaKnown RBP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 NT5C2P49902 561 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 NOGQ13253 232 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 ADAM9Q13443 819 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 STIM1Q13586 685 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 PTPAQ15257 358 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 SV2CQ496J9 727 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 PARP10Q53GL7 1025 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 SLC35F1Q5T1Q4 408 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 IFIT1BQ5T764 474 aaKnown RBP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 CST9Q5W186 159 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 STEAP3Q658P3 488 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 GLB1LQ6UWU2 654 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 CCDC103Q8IW40 242 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 AMOTL1Q8IY63 956 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 IFNL3Q8IZI9 196 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 FAM177A1Q8N128 213 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 TXLNBQ8N3L3 684 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms