RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SCNN1GP51170 649 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 BPIFB4P59827 614 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 MYL6P60660 151 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 NOP14P78316 857 aaKnown RBP9.9□□□□□ -0.82
ACTN1-218ENST00000556343 TUSC3Q13454 348 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 ASIC2Q16515 512 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 SV2CQ496J9 727 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 HS1BP3Q53T59 392 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 C9orf57Q5W0N0 161 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 DCLRE1AQ6PJP8 1040 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 LMO3Q8TAP4 145 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 HELQQ8TDG4 1101 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 LINC01599Q8WXQ3 324 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 SEMA4DQ92854 862 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 BADQ92934 168 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 ZFP42Q96MM3 310 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 ZMAT2Q96NC0 199 aaKnown RBP9.9□□□□□ -0.82
ACTN1-218ENST00000556343 PPP1R10Q96QC0 940 aaKnown RBP9.9□□□□□ -0.82
ACTN1-218ENST00000556343 NIF3L1Q9GZT8 377 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 GANQ9H2C0 597 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 VRTNQ9H8Y1 702 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 CYP3A43Q9HB55 503 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 NLRC4Q9NPP4 1024 aa9.9□□□□□ -0.82
ACTN1-218ENST00000556343 PTPRJQ12913 1337 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-218ENST00000556343 TBKBP1A7MCY6 615 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 PODXLO00592 558 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 PTGESO14684 152 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 TRAPPC3O43617 180 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 MFAP3LO75121 409 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 VNN1O95497 513 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 GYPCP04921 128 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 ALDH2P05091 517 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 ACRP10323 421 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 ITGB8P26012 769 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 ADKP55263 362 aaKnown RBP9.89□□□□□ -0.83
ACTN1-218ENST00000556343 CUL2Q13617 745 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 DRAP1Q14919 205 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-218ENST00000556343 PTPN21Q16825 1174 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 ARHGAP44Q17R89 818 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 WDR72Q3MJ13 1102 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 IQCEQ6IPM2 695 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 PHLDB3Q6NSJ2 640 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 PDXDC1Q6P996 788 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 DSTYKQ6XUX3 929 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 VPS36Q86VN1 386 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 PHOSPHO2Q8TCD6 241 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 TOP1MTQ969P6 601 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 C18orf25Q96B23 403 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-218ENST00000556343 MMS19Q96T76 1030 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 PI4K2AQ9BTU6 479 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 COLEC11Q9BWP8 271 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 TTYH3Q9C0H2 523 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 NXF1Q9UBU9 619 aaKnown RBP9.89□□□□□ -0.83
ACTN1-218ENST00000556343 SIX4Q9UIU6 781 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 NUB1Q9Y5A7 615 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 FHOD1Q9Y613 1164 aa9.89□□□□□ -0.83
ACTN1-218ENST00000556343 ANO9A1A5B4 782 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 KPNA7A9QM74 516 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 PIRO00625 290 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 MEFVO15553 781 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-218ENST00000556343 HUS1O60921 280 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 NOL4O94818 638 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 UPP2O95045 317 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 SOX5P35711 763 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 USP8P40818 1118 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 FXR1P51114 621 aaKnown RBP eCLIP9.88□□□□□ -0.83
ACTN1-218ENST00000556343 CYP26C1Q6V0L0 522 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.88□□□□□ -0.83
ACTN1-218ENST00000556343 DPH6Q7L8W6 267 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 METTL23Q86XA0 190 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 TMTC1Q8IUR5 882 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 LRRC8AQ8IWT6 810 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 LRRC43Q8N309 656 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 TATDN2Q93075 761 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 DNAJC7Q99615 494 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 BAG1Q99933 345 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-218ENST00000556343 TMEM175Q9BSA9 504 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 ZBED2Q9BTP6 218 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 DEF6Q9H4E7 631 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 SIX2Q9NPC8 291 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 AAASQ9NRG9 546 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 ABHD10Q9NUJ1 306 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 MIOSQ9NXC5 875 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 AIPL1Q9NZN9 384 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 TUBGCP4Q9UGJ1 667 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 DSEQ9UL01 958 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 FAN1Q9Y2M0 1017 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 PCDHB4Q9Y5E5 795 aa9.88□□□□□ -0.83
ACTN1-218ENST00000556343 CASTOR2A6NHX0 329 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 LRRC53A6NM62 1247 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 MEIS3P2A8K0S8 358 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 TADA2AO75478 443 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 B3GAT3O94766 335 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 KIF4AO95239 1232 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 IPO7O95373 1038 aaKnown RBP9.87□□□□□ -0.83
ACTN1-218ENST00000556343 SERPING1P05155 500 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 FGFR1P11362 822 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 KRT5P13647 590 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 SYN1P17600 705 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms