RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 NPTX2P47972 431 aa16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 TRAPPC10P48553 1259 aa16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 PEX3P56589 373 aa16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 MTAPQ13126 283 aa16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 CTXN3Q4LDR2 81 aa16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 FAM78AQ5JUQ0 283 aa16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 CEP120Q8N960 986 aa16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 LEMD2Q8NC56 503 aa16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 APPL2Q8NEU8 664 aa16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 DRC1Q96MC2 740 aa16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 ZNF512Q96ME7 567 aaPredicted RBP16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 DDX19AQ9NUU7 478 aaKnown RBP16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 GMEB2Q9UKD1 530 aa16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 RAB23Q9ULC3 237 aa16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 NOL7Q9UMY1 257 aaKnown RBP16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 NDRG2Q9UN36 371 aaKnown RBP16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 RBM19Q9Y4C8 960 aaKnown RBP16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 TICRRQ7Z2Z1 1910 aa16.91■□□□□ 0.3
SUPT16H-205ENST00000556217 PDCD11Q14690 1871 aaKnown RBP16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 PSMC3P17980 439 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 FCARP24071 287 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 FZD5Q13467 585 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 GRM2Q14416 872 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 PDIA5Q14554 519 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 ECM1Q16610 540 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 ZNF280DQ6N043 979 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 TSSK4Q6SA08 328 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 SMARCD2Q92925 531 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 TCEAL4Q96EI5 215 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 ASB16Q96NS5 453 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 PTPRHQ9HD43 1115 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 TRPV5Q9NQA5 729 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 KMT5AQ9NQR1 393 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 CNTN3Q9P232 1028 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 FBXL5Q9UKA1 691 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 DNM3Q9UQ16 869 aa16.9■□□□□ 0.3
SUPT16H-205ENST00000556217 MYH11P35749 1972 aa16.89■□□□□ 0.3
SUPT16H-205ENST00000556217 SEC24AO95486 1093 aa16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 MCM4P33991 863 aa16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 MRPL58Q14197 206 aaKnown RBP16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 MPZL3Q6UWV2 235 aa16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 MAMSTRQ6ZN01 415 aa16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 SNX29Q8TEQ0 813 aa16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 DEPDC1BQ8WUY9 529 aa16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 SUSD3Q96L08 255 aa16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 ZMAT2Q96NC0 199 aaKnown RBP16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 TARS2Q9BW92 718 aaKnown RBP16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 CHRDQ9H2X0 955 aa16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 C17orf75Q9HAS0 396 aa16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 ASAH2Q9NR71 780 aa16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 ARHGAP28Q9P2N2 729 aa16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 AFF4Q9UHB7 1163 aaKnown RBP16.89■□□□□ 0.29
SUPT16H-205ENST00000556217 HIP1RO75146 1068 aa16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 CPB1P15086 417 aa16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 TGM1P22735 817 aa16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 MARCKSP29966 332 aaPredicted RBP16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 GDI1P31150 447 aa16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 CCR3P51677 355 aa16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 POTEHQ6S545 545 aa16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 FAM3CQ92520 227 aa16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 E2F7Q96AV8 911 aa16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 C18orf25Q96B23 403 aaPredicted RBP16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 LLPHQ9BRT6 129 aaKnown RBP16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 ZNF334Q9HCZ1 680 aaPredicted RBP16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 KCNG1Q9UIX4 513 aa16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 PIAS3Q9Y6X2 628 aa16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 CNOT1A5YKK6 2376 aaKnown RBP16.88■□□□□ 0.29
SUPT16H-205ENST00000556217 COL4A2P08572 1712 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 SHISA7A6NL88 538 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 ZNF263O14978 683 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 HARSP12081 509 aaKnown RBP16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 MYL4P12829 197 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 PROZP22891 400 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 CCR2P41597 374 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 ST3GAL1Q11201 340 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 TWF1Q12792 350 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 STRN3Q13033 797 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 PPM1JQ5JR12 505 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 KRT79Q5XKE5 535 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 C1orf228Q6PIY5 440 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 VITQ6UXI7 678 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 MAP4K3Q8IVH8 894 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 ZNF687Q8N1G0 1237 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 CELF5Q8N6W0 485 aaKnown RBP16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 C4orf32Q8N8J7 132 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 IGSF22Q8N9C0 903 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 FBXO18Q8NFZ0 1043 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 DDX12PQ92771 950 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 TBC1D32Q96NH3 1257 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 TIPINQ9BVW5 301 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 OXCT2Q9BYC2 517 aaPredicted RBP16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 GPR88Q9GZN0 384 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 LMAN1LQ9HAT1 526 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 TRPV4Q9HBA0 871 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 PCDHB8Q9UN66 801 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 LIMCH1Q9UPQ0 1083 aa16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.87■□□□□ 0.29
SUPT16H-205ENST00000556217 E9PMD0 336 aa16.86■□□□□ 0.29
SUPT16H-205ENST00000556217 EPHA5P54756 1037 aa16.86■□□□□ 0.29
SUPT16H-205ENST00000556217 MLLT6P55198 1093 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms