RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 MYBPC2Q14324 1141 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 HSP90AA2PQ14568 343 aaPredicted RBP12.06□□□□□ -0.48
CHGA-205ENST00000556098 ZCWPW2Q504Y3 356 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 EPM2AIP1Q7L775 607 aaPredicted RBP12.06□□□□□ -0.48
CHGA-205ENST00000556098 KSR1Q8IVT5 923 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 EXOC8Q8IYI6 725 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 TMEM174Q8WUU8 243 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 SMG7Q92540 1137 aaKnown RBP12.06□□□□□ -0.48
CHGA-205ENST00000556098 HVCN1Q96D96 273 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 NUP58Q9BVL2 599 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 SRRTQ9BXP5 876 aaKnown RBP12.06□□□□□ -0.48
CHGA-205ENST00000556098 ST6GALNAC4Q9H4F1 302 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 FAM105AQ9NUU6 356 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 IGSF9Q9P2J2 1179 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 NCDNQ9UBB6 729 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 TRAF3IP3Q9Y228 551 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 FAN1Q9Y2M0 1017 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 CLUHO75153 1309 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 TRIP11Q15643 1979 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 CACNA1IQ9P0X4 2223 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 B4GALT3O60512 393 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 N4BP1O75113 896 aaKnown RBP12.05□□□□□ -0.48
CHGA-205ENST00000556098 LRRN2O75325 713 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 OFD1O75665 1012 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 RFPL2O75678 378 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 TUBB4AP04350 444 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 SP9P0CG40 484 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 SKIP12755 728 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 YWHABP31946 246 aaKnown RBP12.05□□□□□ -0.48
CHGA-205ENST00000556098 RARRES1P49788 294 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 TBX2Q13207 712 aaPredicted RBP12.05□□□□□ -0.48
CHGA-205ENST00000556098 PUM1Q14671 1186 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHGA-205ENST00000556098 MAN2A1Q16706 1144 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 RSPO4Q2I0M5 234 aaPredicted RBP12.05□□□□□ -0.48
CHGA-205ENST00000556098 FKBP15Q5T1M5 1219 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 ANKRD40Q6AI12 368 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 ELMSAN1Q6PJG2 1045 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 FILIP1Q7Z7B0 1213 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 PALB2Q86YC2 1186 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 LINC01465Q8N7H1 131 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 MCPH1Q8NEM0 835 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 KIAA1524Q8TCG1 905 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 ZNF507Q8TCN5 953 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 KCNN1Q92952 543 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 PGBD4Q96DM1 585 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 CNOT6LQ96LI5 555 aaKnown RBP12.05□□□□□ -0.48
CHGA-205ENST00000556098 NAP1L5Q96NT1 182 aaPredicted RBP12.05□□□□□ -0.48
CHGA-205ENST00000556098 CNTNAP3BQ96NU0 1288 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 MYADMQ96S97 322 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 DUSP9Q99956 384 aaKnown RBP12.05□□□□□ -0.48
CHGA-205ENST00000556098 APOL6Q9BWW8 343 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 CNTNAP3Q9BZ76 1288 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 FOXQ1Q9C009 403 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 SUCLA2Q9P2R7 463 aaPredicted RBP12.05□□□□□ -0.48
CHGA-205ENST00000556098 WNT16Q9UBV4 365 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 SIT1Q9Y3P8 196 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 PCDHB13Q9Y5F0 798 aa12.05□□□□□ -0.48
CHGA-205ENST00000556098 TICRRQ7Z2Z1 1910 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 TRIM49BA6NDI0 452 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 CETN3O15182 167 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 SLC16A3O15427 465 aaKnown RBP12.04□□□□□ -0.48
CHGA-205ENST00000556098 DDHD2O94830 711 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 GLUD1P00367 558 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 ADH1AP07327 375 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 KCNA4P22459 653 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 KNOP1Q1ED39 458 aaKnown RBP12.04□□□□□ -0.48
CHGA-205ENST00000556098 FIGNQ5HY92 759 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 PLA2G4FQ68DD2 849 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 DCLRE1AQ6PJP8 1040 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 PADI6Q6TGC4 694 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 SFR1Q86XK3 245 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 SLC44A3Q8N4M1 653 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 SCFD1Q8WVM8 642 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 RUBCNQ92622 972 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 KIFAP3Q92845 792 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 PANX2Q96RD6 677 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 TUBGCP2Q9BSJ2 902 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 MKNK1Q9BUB5 465 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 RUSC1Q9BVN2 902 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 INO80BQ9C086 356 aaPredicted RBP12.04□□□□□ -0.48
CHGA-205ENST00000556098 KCTD10Q9H3F6 313 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 KCNF1Q9H3M0 494 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 SEMA4AQ9H3S1 761 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 TMEM206Q9H813 350 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 MRPL44Q9H9J2 332 aaKnown RBP12.04□□□□□ -0.48
CHGA-205ENST00000556098 METTL14Q9HCE5 456 aaKnown RBP12.04□□□□□ -0.48
CHGA-205ENST00000556098 ARHGEF3Q9NR81 526 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 CHST12Q9NRB3 414 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 SPTLC3Q9NUV7 552 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 INTS13Q9NVM9 706 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 SPATA6Q9NWH7 488 aaPredicted RBP12.04□□□□□ -0.48
CHGA-205ENST00000556098 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
CHGA-205ENST00000556098 MAPK8IP1Q9UQF2 711 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 PCDHB2Q9Y5E7 798 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 IRAK3Q9Y616 596 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 PHLPP2Q6ZVD8 1323 aa12.04□□□□□ -0.48
CHGA-205ENST00000556098 KIF2AO00139 706 aaPredicted RBP12.03□□□□□ -0.48
CHGA-205ENST00000556098 NRP1O14786 923 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 ARHGAP6O43182 974 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 GAS2O43903 313 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms