RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ANO5Q75V66 913 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 SV2AQ7L0J3 742 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 ZDHHC14Q8IZN3 488 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 BBOF1Q8ND07 529 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 C1orf54Q8WWF1 131 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 PSPC1Q8WXF1 523 aaKnown RBP7.46□□□□□ -1.22
TDP1-213ENST00000555880 DDX1Q92499 740 aaKnown RBP7.46□□□□□ -1.22
TDP1-213ENST00000555880 DHX38Q92620 1227 aaKnown RBP7.46□□□□□ -1.22
TDP1-213ENST00000555880 GPRASP2Q96D09 838 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 FBXL18Q96ME1 805 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 SCLT1Q96NL6 688 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 SERPINB12Q96P63 405 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 ZNF317Q96PQ6 595 aaPredicted RBP7.46□□□□□ -1.22
TDP1-213ENST00000555880 FNBP1Q96RU3 617 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 PRMT1Q99873 361 aaKnown RBP7.46□□□□□ -1.22
TDP1-213ENST00000555880 CCDC77Q9BR77 488 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 PDCD2LQ9BRP1 358 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 NTPCRQ9BSD7 190 aaKnown RBP7.46□□□□□ -1.22
TDP1-213ENST00000555880 OSBPL7Q9BZF2 842 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 MTFR1LQ9H019 292 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 TOPORSQ9NS56 1045 aaPredicted RBP7.46□□□□□ -1.22
TDP1-213ENST00000555880 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.46□□□□□ -1.22
TDP1-213ENST00000555880 ANAPC5Q9UJX4 755 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 ZNRF3Q9ULT6 936 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 KIAA1217Q5T5P2 1943 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 CHUKO15111 745 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 MAFGO15525 162 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 THAP12O43422 761 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 ATP2C2O75185 946 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 RASSF9O75901 435 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 DGAT1O75907 488 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 ACSL3O95573 720 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 ADCY8P40145 1251 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 PIK3CAP42336 1068 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 IFNAR2P48551 515 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 LIG4P49917 911 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 RTP1P59025 263 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 MAP3K10Q02779 954 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 STRN3Q13033 797 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 TRIM72Q6ZMU5 477 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 ZNF365Q70YC5 407 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 MCOLN2Q8IZK6 566 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 ATL2Q8NHH9 583 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.45□□□□□ -1.22
TDP1-213ENST00000555880 IPO4Q8TEX9 1081 aaKnown RBP7.45□□□□□ -1.22
TDP1-213ENST00000555880 CCT6BQ92526 530 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 SGSM3Q96HU1 749 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 LRCH3Q96II8 777 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 CDHR1Q96JP9 859 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 SENP7Q9BQF6 1050 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 PLCD4Q9BRC7 762 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 FAM213AQ9BRX8 229 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 TRAIPQ9BWF2 469 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 ADAM7Q9H2U9 754 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 CDC42EP4Q9H3Q1 356 aaKnown RBP7.45□□□□□ -1.22
TDP1-213ENST00000555880 ATP6V0A4Q9HBG4 840 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 MRPL47Q9HD33 250 aaKnown RBP7.45□□□□□ -1.22
TDP1-213ENST00000555880 GABBR1Q9UBS5 961 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 SCINQ9Y6U3 715 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 MYH9P35579 1960 aaKnown RBP7.45□□□□□ -1.22
TDP1-213ENST00000555880 DNM1LO00429 736 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 PSTPIP1O43586 416 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 EXTL3O43909 919 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 GRIN3BO60391 1043 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 SORBS3O60504 671 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 ATP9AO75110 1047 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 DNAJC8O75937 253 aaPredicted RBP7.45□□□□□ -1.22
TDP1-213ENST00000555880 PROSCO94903 275 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 GSTA1P08263 222 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 TNNI1P19237 187 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 KCNA3P22001 575 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 LMNB2Q03252 620 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 PTP4A2Q12974 167 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 CNGA2Q16280 664 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 LONRF1Q17RB8 773 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 NBPF9Q3BBW0 867 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 SLC39A4Q6P5W5 647 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 CYB5D1Q6P9G0 228 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.45□□□□□ -1.22
TDP1-213ENST00000555880 PIGWQ7Z7B1 504 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 CPNE8Q86YQ8 564 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 RHOT1Q8IXI2 618 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 PARP9Q8IXQ6 854 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 LRRC34Q8IZ02 419 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 CCDC89Q8N998 374 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 CPA5Q8WXQ8 436 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 ARHGEF2Q92974 986 aaKnown RBP7.45□□□□□ -1.22
TDP1-213ENST00000555880 PI4K2AQ9BTU6 479 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 DDX23Q9BUQ8 820 aaKnown RBP7.45□□□□□ -1.22
TDP1-213ENST00000555880 JPH1Q9HDC5 661 aaPredicted RBP7.45□□□□□ -1.22
TDP1-213ENST00000555880 A1CFQ9NQ94 594 aaKnown RBP7.45□□□□□ -1.22
TDP1-213ENST00000555880 RNF146Q9NTX7 359 aa7.45□□□□□ -1.22
TDP1-213ENST00000555880 SRCAPQ6ZRS2 3230 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 MROH7Q68CQ1 1323 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 GSTTP1A0A1W2PQM5 241 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 TTC4O95801 387 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 ITGBL1O95965 494 aaPredicted RBP7.44□□□□□ -1.22
TDP1-213ENST00000555880 NR3C2P08235 984 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 UNGP13051 313 aaPredicted RBP7.44□□□□□ -1.22
TDP1-213ENST00000555880 RRM1P23921 792 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms