RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 TM6SF1Q9BZW5 370 aa4.81□□□□□ -1.64
FOXN3-210ENST00000555658 NAPBQ9H115 298 aa4.81□□□□□ -1.64
FOXN3-210ENST00000555658 NELFAQ9H3P2 528 aa4.81□□□□□ -1.64
FOXN3-210ENST00000555658 ARMT1Q9H993 441 aa4.81□□□□□ -1.64
FOXN3-210ENST00000555658 ATP8A2Q9NTI2 1148 aa4.81□□□□□ -1.64
FOXN3-210ENST00000555658 GALNT8Q9NY28 637 aa4.81□□□□□ -1.64
FOXN3-210ENST00000555658 AATFQ9NY61 560 aaKnown RBP eCLIP4.81□□□□□ -1.64
FOXN3-210ENST00000555658 FAM184BQ9ULE4 1060 aa4.81□□□□□ -1.64
FOXN3-210ENST00000555658 SNX14Q9Y5W7 946 aa4.81□□□□□ -1.64
FOXN3-210ENST00000555658 CYP46A1Q9Y6A2 500 aa4.81□□□□□ -1.64
FOXN3-210ENST00000555658 NRXN2Q9P2S2 1712 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 GPR75-ASB3A0A0A6YYF3 556 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 FAM90A27PA6NNH2 459 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 GSG1L2A8MUP6 293 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 SLC3A2P08195 630 aaKnown RBP4.8□□□□□ -1.64
FOXN3-210ENST00000555658 VIL1P09327 827 aaKnown RBP4.8□□□□□ -1.64
FOXN3-210ENST00000555658 SRGAP2CP0DJJ0 459 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 ACRV1P26436 265 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 MSX2P35548 267 aaPredicted RBP4.8□□□□□ -1.64
FOXN3-210ENST00000555658 SUMO1P63165 101 aaKnown RBP4.8□□□□□ -1.64
FOXN3-210ENST00000555658 NFYCQ13952 458 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 SMN1Q16637 294 aaKnown RBP4.8□□□□□ -1.64
FOXN3-210ENST00000555658 DACT2Q5SW24 774 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 VPS53Q5VIR6 699 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 YOD1Q5VVQ6 348 aaPredicted RBP4.8□□□□□ -1.64
FOXN3-210ENST00000555658 BLOC1S2Q6QNY1 142 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 C16orf59Q7L2K0 433 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 SGMS1Q86VZ5 419 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 OSTM1Q86WC4 334 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 PTRH1Q86Y79 214 aaKnown RBP4.8□□□□□ -1.64
FOXN3-210ENST00000555658 HSCBQ8IWL3 235 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 ZC3H7AQ8IWR0 971 aaKnown RBP4.8□□□□□ -1.64
FOXN3-210ENST00000555658 CKAP2LQ8IYA6 745 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 LCORLQ8N3X6 602 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 SH3RF2Q8TEC5 729 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 NEU4Q8WWR8 484 aaPredicted RBP4.8□□□□□ -1.64
FOXN3-210ENST00000555658 SNX21Q969T3 373 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 IL17RAQ96F46 866 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 JAKMIP1Q96N16 626 aaKnown RBP4.8□□□□□ -1.64
FOXN3-210ENST00000555658 NEK1Q96PY6 1258 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 CEP89Q96ST8 783 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 RIOK1Q9BRS2 568 aaKnown RBP4.8□□□□□ -1.64
FOXN3-210ENST00000555658 BTBD2Q9BX70 525 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 KIAA1683Q9H0B3 1180 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 OR10A2Q9H208 303 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 HDAC9Q9UKV0 1011 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 LAMB2P55268 1798 aa4.8□□□□□ -1.64
FOXN3-210ENST00000555658 TNRC6CQ9HCJ0 1690 aaKnown RBP4.8□□□□□ -1.64
FOXN3-210ENST00000555658 MROH7-TTC4A0A0A0MT08 1334 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 TRBV23-1A0A0A0MS06 115 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 YDJCA8MPS7 323 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 MAN2B1O00754 1011 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 KLF4O43474 513 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 PRKAB2O43741 272 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 PPFIA2O75334 1257 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 HSP90AA1P07900 732 aaKnown RBP4.79□□□□□ -1.64
FOXN3-210ENST00000555658 CYP21A2P08686 494 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 PYGMP11217 842 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 PCP11498 1178 aaKnown RBP4.79□□□□□ -1.64
FOXN3-210ENST00000555658 CASTP20810 708 aaKnown RBP4.79□□□□□ -1.64
FOXN3-210ENST00000555658 RPS12P25398 132 aaKnown RBP4.79□□□□□ -1.64
FOXN3-210ENST00000555658 ECE1P42892 770 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 BTDP43251 543 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 MRE11P49959 708 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 DNM2P50570 870 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 INHBCP55103 352 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 HERVK_113P62684 666 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 DYNLL1P63167 89 aaKnown RBP4.79□□□□□ -1.64
FOXN3-210ENST00000555658 IL13RA1P78552 427 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 CXCL9Q07325 125 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 DPTQ07507 201 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 TUBA3CQ13748 450 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 RAB33AQ14088 237 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 ANKRD1Q15327 319 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 DLGAP5Q15398 846 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 GPR162Q16538 588 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 MTERF2Q49AM1 385 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 TUBA3EQ6PEY2 450 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 MAMDC4Q6UXC1 1216 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 MFSD6Q6ZSS7 791 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 RUFY3Q7L099 469 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 FILIP1Q7Z7B0 1213 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 ADGRA1Q86SQ6 560 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 TEX11Q8IYF3 940 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 D2HGDHQ8N465 521 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 ZNF808Q8N4W9 903 aaPredicted RBP4.79□□□□□ -1.64
FOXN3-210ENST00000555658 CERS5Q8N5B7 392 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 AMER2Q8N7J2 671 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 SLC43A3Q8NBI5 491 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 AGBL3Q8NEM8 1001 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 NCOA7Q8NI08 942 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 ZNF384Q8TF68 577 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 CHMP4CQ96CF2 233 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 MXD3Q9BW11 206 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 UPF3BQ9BZI7 483 aaKnown RBP4.79□□□□□ -1.64
FOXN3-210ENST00000555658 KRT23Q9C075 422 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 RNF41Q9H4P4 317 aaPredicted RBP4.79□□□□□ -1.64
FOXN3-210ENST00000555658 ZNF287Q9HBT7 754 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 TLR9Q9NR96 1032 aa4.79□□□□□ -1.64
FOXN3-210ENST00000555658 TOMM22Q9NS69 142 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms