RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 ITPRIPL2Q3MIP1 535 aa12.74□□□□□ -0.37
ABCD4-222ENST00000555617 USP17L6PQ6QN14 398 aa12.74□□□□□ -0.37
ABCD4-222ENST00000555617 TMEM92Q6UXU6 159 aa12.74□□□□□ -0.37
ABCD4-222ENST00000555617 ZC3H18Q86VM9 953 aaKnown RBP12.74□□□□□ -0.37
ABCD4-222ENST00000555617 TMPRSS12Q86WS5 348 aa12.74□□□□□ -0.37
ABCD4-222ENST00000555617 PNMA5Q96PV4 448 aa12.74□□□□□ -0.37
ABCD4-222ENST00000555617 TTPALQ9BTX7 342 aa12.74□□□□□ -0.37
ABCD4-222ENST00000555617 COLEC11Q9BWP8 271 aa12.74□□□□□ -0.37
ABCD4-222ENST00000555617 NACAP1Q9BZK3 213 aa12.74□□□□□ -0.37
ABCD4-222ENST00000555617 LRRCC1Q9C099 1032 aa12.74□□□□□ -0.37
ABCD4-222ENST00000555617 NRSN2Q9GZP1 204 aa12.74□□□□□ -0.37
ABCD4-222ENST00000555617 TOMM22Q9NS69 142 aa12.74□□□□□ -0.37
ABCD4-222ENST00000555617 ANAPC4Q9UJX5 808 aa12.74□□□□□ -0.37
ABCD4-222ENST00000555617 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.74□□□□□ -0.37
ABCD4-222ENST00000555617 SDK2Q58EX2 2172 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 APCP25054 2843 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 ZBTB5O15062 677 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 DIAPH2O60879 1101 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 PRAMEF12O95522 483 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 IFIT2P09913 472 aaKnown RBP12.73□□□□□ -0.37
ABCD4-222ENST00000555617 MYL4P12829 197 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 PLEKHG6Q3KR16 790 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 ARHGAP29Q52LW3 1261 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 FAM171A1Q5VUB5 890 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 TRIM68Q6AZZ1 485 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 DBX2Q6ZNG2 339 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 ARID3BQ8IVW6 561 aaPredicted RBP12.73□□□□□ -0.37
ABCD4-222ENST00000555617 SMG8Q8ND04 991 aaKnown RBP12.73□□□□□ -0.37
ABCD4-222ENST00000555617 PNMA1Q8ND90 353 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 RHBDD1Q8TEB9 315 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 NLRP7Q8WX94 980 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 PGBD4Q96DM1 585 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 SCLT1Q96NL6 688 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 GMIPQ9P107 970 aa12.73□□□□□ -0.37
ABCD4-222ENST00000555617 CNTNAP2Q9UHC6 1331 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 ARL5CA6NH57 179 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 ZNF197O14709 1029 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 RNF113AO15541 343 aaKnown RBP12.72□□□□□ -0.37
ABCD4-222ENST00000555617 SEC24AO95486 1093 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 SLC26A2P50443 739 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 BNC1Q01954 994 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 ASPRV1Q53RT3 343 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 HOMER1Q86YM7 354 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 GSTCDQ8NEC7 633 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 HIC2Q96JB3 615 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 TTC14Q96N46 770 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 MAP7D2Q96T17 732 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 EPN3Q9H201 632 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 CEP72Q9P209 647 aa12.72□□□□□ -0.37
ABCD4-222ENST00000555617 NIPBLQ6KC79 2804 aaeCLIP12.72□□□□□ -0.37
ABCD4-222ENST00000555617 A0A087WZ62 844 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 TRIM27P14373 513 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 JUPP14923 745 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 DCTP40126 519 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 DPP6P42658 865 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 UCNP55089 124 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 ZNF33AQ06730 810 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 VPS53Q5VIR6 699 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 ABHD15Q6UXT9 468 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 ERC1Q8IUD2 1116 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 ACDQ96AP0 544 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 CDC6Q99741 560 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 FDXACB1Q9BRP7 624 aaPredicted RBP12.71□□□□□ -0.37
ABCD4-222ENST00000555617 SLITRK6Q9H5Y7 841 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 HES2Q9Y543 173 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 CDY1Q9Y6F8 540 aa12.71□□□□□ -0.37
ABCD4-222ENST00000555617 MEIS2O14770 477 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 BACH1O14867 736 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 CILPO75339 1184 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 KIF4AO95239 1232 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 LRG1P02750 347 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 ACTN2P35609 894 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 EPHA5P54756 1037 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 PSMD2Q13200 908 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 SPDYCQ5MJ68 293 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 BROXQ5VW32 411 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 POTEDQ86YR6 584 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 MMP21Q8N119 569 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 CCDC33Q8N5R6 958 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 KBTBD3Q8NAB2 608 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 ZNF248Q8NDW4 579 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 E2F7Q96AV8 911 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 CDHR1Q96JP9 859 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 PIGSQ96S52 555 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 TM7SF3Q9NS93 570 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 SSUH2Q9Y2M2 353 aa12.7□□□□□ -0.38
ABCD4-222ENST00000555617 SF3B1O75533 1304 aaKnown RBP eCLIP12.69□□□□□ -0.38
ABCD4-222ENST00000555617 A1L4Q6 167 aa12.69□□□□□ -0.38
ABCD4-222ENST00000555617 K7ENP7 123 aa12.69□□□□□ -0.38
ABCD4-222ENST00000555617 CHRM1P11229 460 aaPredicted RBP12.69□□□□□ -0.38
ABCD4-222ENST00000555617 ARSAP15289 507 aa12.69□□□□□ -0.38
ABCD4-222ENST00000555617 RPL6Q02878 288 aaKnown RBP12.69□□□□□ -0.38
ABCD4-222ENST00000555617 INO80CQ6PI98 192 aaPredicted RBP12.69□□□□□ -0.38
ABCD4-222ENST00000555617 CLASRPQ8N2M8 674 aaKnown RBP12.69□□□□□ -0.38
ABCD4-222ENST00000555617 SMARCC2Q8TAQ2 1214 aa12.69□□□□□ -0.38
ABCD4-222ENST00000555617 USP33Q8TEY7 942 aa12.69□□□□□ -0.38
ABCD4-222ENST00000555617 SPACA7Q96KW9 195 aa12.69□□□□□ -0.38
ABCD4-222ENST00000555617 SMG9Q9H0W8 520 aaKnown RBP12.69□□□□□ -0.38
ABCD4-222ENST00000555617 EBF3Q9H4W6 596 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms