RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 RBP5P82980 135 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 CDK17Q00537 523 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 FAAP100Q0VG06 881 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 SCARA3Q6AZY7 606 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 ALKAL1Q6UXT8 129 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 TOGARAM2Q6ZUX3 1019 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 ENOSF1Q7L5Y1 443 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 NECAB2Q7Z6G3 386 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 MRPL10Q7Z7H8 261 aaKnown RBP10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 TMEM130Q8N3G9 435 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 C1orf127Q8N9H9 656 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 TAF4BQ92750 862 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 LPPQ93052 612 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 CCDC42Q96M95 316 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 KREMEN1Q96MU8 473 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 ZMAT2Q96NC0 199 aaKnown RBP10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 TOX2Q96NM4 488 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 RPS6KC1Q96S38 1066 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 TSPAN18Q96SJ8 248 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 TMEM121BQ9BXQ6 578 aaPredicted RBP10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 CXCL16Q9H2A7 254 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 RNF19AQ9NV58 838 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 TRMT1Q9NXH9 659 aaKnown RBP10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 ARHGAP20Q9P2F6 1191 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 ITGA11Q9UKX5 1188 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 UBQLN1Q9UMX0 589 aaKnown RBP10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 NUB1Q9Y5A7 615 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 EPN1Q9Y6I3 576 aaPredicted RBP10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 UMODL1Q5DID0 1318 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 SMIM28A0A1B0GU29 152 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 RIOK3O14730 519 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 CCP110O43303 1012 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 AKR1B10O60218 316 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 EVI5O60447 810 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 NBNO60934 754 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 ZNF623O75123 536 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 NDUFA10O95299 355 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 IPO7O95373 1038 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 ASS1P00966 412 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 KRT5P13647 590 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 KCNE1P15382 129 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 TBXAS1P24557 533 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 ATICP31939 592 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 CCL23P55773 120 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 GCNT1Q02742 428 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 CUL2Q13617 745 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 LRRC26Q2I0M4 334 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 ZNF667Q5HYK9 610 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 C1orf53Q5VUE5 145 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 HGSNATQ68CP4 663 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 SCARA5Q6ZMJ2 495 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 IRF2BP2Q7Z5L9 587 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 ECHDC2Q86YB7 292 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 CCDC170Q8IYT3 715 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 SEPT8Q92599 483 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 C18orf25Q96B23 403 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 SCLYQ96I15 445 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 DESI2Q9BSY9 194 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 TRAIPQ9BWF2 469 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 FTHL17Q9BXU8 183 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 TANC1Q9C0D5 1861 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 GPR88Q9GZN0 384 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 HAUS4Q9H6D7 363 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 APOBEC3GQ9HC16 384 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 RGS18Q9NS28 235 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 TMEM39AQ9NV64 488 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 NXF1Q9UBU9 619 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 TUBGCP4Q9UGJ1 667 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 SIX4Q9UIU6 781 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 GIT1Q9Y2X7 761 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 PCDHB4Q9Y5E5 795 aa10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 BZW2Q9Y6E2 419 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-220ENST00000555585 A0A0U1RQF3 1178 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 SSU72P8A0A1W2PR75 194 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 MEIS3P2A8K0S8 358 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 ZSCAN12O43309 604 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 PARNO95453 639 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 CLTBP09497 229 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 CCDC175P0C221 793 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 P4HA1P13674 534 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 CYP2C18P33260 490 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 MLH1P40692 756 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 PRKCIP41743 596 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 KIF11P52732 1056 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 MYO1EQ12965 1108 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 SPA17Q15506 151 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 ZBTB6Q15916 424 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 PLEKHG4Q58EX7 1191 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 XKR4Q5GH76 650 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 AGMOQ6ZNB7 445 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 RTN4RL1Q86UN2 441 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 VPS36Q86VN1 386 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 CCAR2Q8N163 923 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 EFCAB3Q8N7B9 438 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 ACRBPQ8NEB7 543 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 DBF4BQ8NFT6 615 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 SHC3Q92529 594 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 APBB2Q92870 758 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 HPDLQ96IR7 371 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms