RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 FAM187BQ17R55 369 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 STXBP5Q5T5C0 1151 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 NT5DC1Q5TFE4 455 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 IQCEQ6IPM2 695 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 TCEAL6Q6IPX3 200 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 GALNT17Q6IS24 598 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 PKN3Q6P5Z2 889 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 WDR5BQ86VZ2 330 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 ZBTB8OSQ8IWT0 167 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 YAF2Q8IY57 180 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 TMEM130Q8N3G9 435 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 SHKBP1Q8TBC3 707 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 DEPDC1BQ8WUY9 529 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 TCEAL3Q969E4 200 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 PRIMPOLQ96LW4 560 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 KIFC3Q9BVG8 833 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 LSM14BQ9BX40 385 aaKnown RBP9.22□□□□□ -0.93
NEK9-206ENST00000555537 SLITRK6Q9H5Y7 841 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 GTSE1Q9NYZ3 720 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 FBXL5Q9UKA1 691 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 ASPMQ8IZT6 3477 aa9.22□□□□□ -0.93
NEK9-206ENST00000555537 FRYQ5TBA9 3013 aa9.21□□□□□ -0.93
NEK9-206ENST00000555537 A0A1W2PRU2 124 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 ACKR2O00590 384 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 WNT7AO00755 349 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 FOXD2O60548 495 aaPredicted RBP9.21□□□□□ -0.94
NEK9-206ENST00000555537 PAPSS2O95340 614 aaPredicted RBP9.21□□□□□ -0.94
NEK9-206ENST00000555537 CTHP32929 405 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 RAP1GAPP47736 663 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 RBM25P49756 843 aaKnown RBP9.21□□□□□ -0.94
NEK9-206ENST00000555537 TNK2Q07912 1038 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 FOXC1Q12948 553 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 MRPL58Q14197 206 aaKnown RBP9.21□□□□□ -0.94
NEK9-206ENST00000555537 MAPK6Q16659 721 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 CTXN3Q4LDR2 81 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 BMP2KLQ5H9B9 411 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 CDCA2Q69YH5 1023 aaPredicted RBP9.21□□□□□ -0.94
NEK9-206ENST00000555537 UNQ6494/PRO21346Q6UXR6 183 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 RNF19BQ6ZMZ0 732 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 CACNA2D4Q7Z3S7 1137 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 SLFN12Q8IYM2 578 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 ELMOD1Q8N336 334 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 CEP120Q8N960 986 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 ZMAT2Q96NC0 199 aaKnown RBP9.21□□□□□ -0.94
NEK9-206ENST00000555537 ADPGKQ9BRR6 497 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 CCDC113Q9H0I3 377 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 TTC12Q9H892 705 aaPredicted RBP9.21□□□□□ -0.94
NEK9-206ENST00000555537 TRPV4Q9HBA0 871 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 CHD8Q9HCK8 2581 aa9.21□□□□□ -0.94
NEK9-206ENST00000555537 PDCD11Q14690 1871 aaKnown RBP9.2□□□□□ -0.94
NEK9-206ENST00000555537 MYBPHLA2RUH7 354 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 C4orf47A7E2U8 309 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 PODXLO00592 558 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 CHADO15335 359 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 RPP40O75818 363 aaKnown RBP9.2□□□□□ -0.94
NEK9-206ENST00000555537 EPN2O95208 641 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 SPATA31C1P0DKV0 1188 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 CCDC192P0DO97 292 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 CDR1P51861 262 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 MLLT6P55198 1093 aaPredicted RBP9.2□□□□□ -0.94
NEK9-206ENST00000555537 NR5A1Q13285 461 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 ACAP1Q15027 740 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 DGKKQ5KSL6 1271 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 PLA2G2CQ5R387 149 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 RNF43Q68DV7 783 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 ARID3BQ8IVW6 561 aaPredicted RBP9.2□□□□□ -0.94
NEK9-206ENST00000555537 DEPTORQ8TB45 409 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 FAM200AQ8TCP9 573 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 GAB3Q8WWW8 586 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 C18orf25Q96B23 403 aaPredicted RBP9.2□□□□□ -0.94
NEK9-206ENST00000555537 UROC1Q96N76 676 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 PGLYRP2Q96PD5 576 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 LRRC3Q9BY71 257 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 C8orf33Q9H7E9 229 aaPredicted RBP9.2□□□□□ -0.94
NEK9-206ENST00000555537 ASAH2Q9NR71 780 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 CHD6Q8TD26 2715 aa9.2□□□□□ -0.94
NEK9-206ENST00000555537 H7C4K7 107 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 DCLK1O15075 740 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 CDC45O75419 566 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 MED24O75448 989 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 VNN2O95498 520 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 OR4Q2P0C623 313 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 XRCC6P12956 609 aaKnown RBP eCLIP9.19□□□□□ -0.94
NEK9-206ENST00000555537 PSMA5P28066 241 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 MPLP40238 635 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 NOVA1P51513 510 aaKnown RBP9.19□□□□□ -0.94
NEK9-206ENST00000555537 EPHA5P54756 1037 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 FCHO2Q0JRZ9 810 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 CCINQ13939 588 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 CALCRLQ16602 461 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 ATF7IP2Q5U623 682 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 TPGS2Q68CL5 300 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 ALKAL1Q6UXT8 129 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 RUFY3Q7L099 469 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 RALGPS2Q86X27 583 aaPredicted RBP9.19□□□□□ -0.94
NEK9-206ENST00000555537 CATSPER3Q86XQ3 398 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 KDF1Q8NAX2 398 aaPredicted RBP9.19□□□□□ -0.94
NEK9-206ENST00000555537 MCPH1Q8NEM0 835 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 DDX12PQ92771 950 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 ZNF274Q96GC6 653 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms