RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 AGAP1Q9UPQ3 857 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 NUB1Q9Y5A7 615 aa15.41■□□□□ 0.06
CHD8-208ENST00000555301 GOLGA6L19H0YKK7 550 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 TRAPPC3O43617 180 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 N4BP1O75113 896 aaKnown RBP15.4■□□□□ 0.06
CHD8-208ENST00000555301 FGF18O76093 207 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 KIF4AO95239 1232 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 TPM2P07951 284 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 PRKCSHP14314 528 aaPredicted RBP15.4■□□□□ 0.06
CHD8-208ENST00000555301 CDK11BP21127 795 aaKnown RBP15.4■□□□□ 0.06
CHD8-208ENST00000555301 POLR2BP30876 1174 aaKnown RBP15.4■□□□□ 0.06
CHD8-208ENST00000555301 TAF6P49848 677 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 MXI1P50539 228 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 UBE3AQ05086 875 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 CETN1Q12798 172 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 ELAVL2Q12926 359 aaKnown RBP15.4■□□□□ 0.06
CHD8-208ENST00000555301 MYO1EQ12965 1108 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 MAN2A1Q16706 1144 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 HSP90AA4PQ58FG1 418 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 TDRD10Q5VZ19 366 aaKnown RBP15.4■□□□□ 0.06
CHD8-208ENST00000555301 C15orf39Q6ZRI6 1047 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 KLHL23Q8NBE8 558 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 CXorf38Q8TB03 319 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 ARNTL2Q8WYA1 636 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 RABGGTAQ92696 567 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 ZNF576Q9H609 170 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 MMRN2Q9H8L6 949 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 SIX4Q9UIU6 781 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 LZTS1Q9Y250 596 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 SF3B1O75533 1304 aaKnown RBP eCLIP15.4■□□□□ 0.06
CHD8-208ENST00000555301 LAMA3Q16787 3333 aa15.4■□□□□ 0.06
CHD8-208ENST00000555301 H3BNC9 293 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 SOX1O00570 391 aaPredicted RBP15.39■□□□□ 0.05
CHD8-208ENST00000555301 PMM2O15305 246 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 P4HA2O15460 535 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 AFPP02771 609 aaKnown RBP15.39■□□□□ 0.05
CHD8-208ENST00000555301 ZNF18P17022 549 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 ATICP31939 592 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 FMO5P49326 533 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 LILRA4P59901 499 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 KCNH2Q12809 1159 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 NCOA4Q13772 614 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 SV2CQ496J9 727 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 GPR153Q6NV75 609 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 FUT10Q6P4F1 479 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 SPRED2Q7Z698 418 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 DDX53Q86TM3 631 aaKnown RBP15.39■□□□□ 0.05
CHD8-208ENST00000555301 LUZP1Q86V48 1076 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 TMEM173Q86WV6 379 aaPredicted RBP15.39■□□□□ 0.05
CHD8-208ENST00000555301 C3orf58Q8NDZ4 430 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 FAM84AQ96KN4 292 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 TUBGCP2Q9BSJ2 902 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 CERS4Q9HA82 394 aa15.39■□□□□ 0.05
CHD8-208ENST00000555301 FNDC1Q4ZHG4 1894 aaPredicted RBP15.38■□□□□ 0.05
CHD8-208ENST00000555301 ARHGEF37A1IGU5 675 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 F8W810 466 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 PPEF2O14830 753 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 STAU1O95793 577 aaKnown RBP15.38■□□□□ 0.05
CHD8-208ENST00000555301 CST3P01034 146 aaPredicted RBP15.38■□□□□ 0.05
CHD8-208ENST00000555301 ITGB1P05556 798 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 PIK3CAP42336 1068 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 AARSP49588 968 aaKnown RBP eCLIP15.38■□□□□ 0.05
CHD8-208ENST00000555301 GPM6BQ13491 265 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 CBWD6Q4V339 395 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 CBWD3Q5JTY5 395 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 CBWD5Q5RIA9 395 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 ZNF697Q5TEC3 545 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 CD300LGQ6UXG3 332 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 CCDC150Q8NCX0 1101 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 FBXL13Q8NEE6 735 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 HASPINQ8TF76 798 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 BCL7CQ8WUZ0 217 aaPredicted RBP15.38■□□□□ 0.05
CHD8-208ENST00000555301 TAF4BQ92750 862 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 LRCH3Q96II8 777 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 HPDLQ96IR7 371 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 IMPG2Q9BZV3 1241 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 HSD3B7Q9H2F3 369 aa15.38■□□□□ 0.05
CHD8-208ENST00000555301 LIMA1Q9UHB6 759 aaKnown RBP15.38■□□□□ 0.05
CHD8-208ENST00000555301 RALGAPA2Q2PPJ7 1873 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 KPNA7A9QM74 516 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 VNN1O95497 513 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 HLA-DRAP01903 254 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 SOD2P04179 222 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 MYL7Q01449 175 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 BMS1Q14692 1282 aaKnown RBP15.37■□□□□ 0.05
CHD8-208ENST00000555301 KRT31Q15323 416 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 SGSM1Q2NKQ1 1148 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 VWA3BQ502W6 1294 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 DSTYKQ6XUX3 929 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 TMEM130Q8N3G9 435 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 SPPL3Q8TCT6 385 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 TAS1R2Q8TE23 839 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 LMAN2LQ9H0V9 348 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 NDST4Q9H3R1 872 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 VRTNQ9H8Y1 702 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 RAB20Q9NX57 234 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 COQ4Q9Y3A0 265 aa15.37■□□□□ 0.05
CHD8-208ENST00000555301 LRRC10BA6NIK2 292 aa15.36■□□□□ 0.05
CHD8-208ENST00000555301 M0QZQ0 153 aa15.36■□□□□ 0.05
CHD8-208ENST00000555301 SYN3O14994 580 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms