RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 KSR1Q8IVT5 923 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 C4orf19Q8IY42 314 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 ANKLE1Q8NAG6 615 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 XXYLT1Q8NBI6 393 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 LMO3Q8TAP4 145 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 MGARPQ8TDB4 240 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 DNAJC9Q8WXX5 260 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 ZBED3Q96IU2 234 aaPredicted RBP11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 AGBL1Q96MI9 1066 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 TUBB6Q9BUF5 446 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 TMEM39BQ9GZU3 492 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 AAASQ9NRG9 546 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 ANKEF1Q9NU02 776 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 SENP1Q9P0U3 644 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 PGAP2Q9UHJ9 254 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 TCEAL9Q9UHQ7 104 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 GGT7Q9UJ14 662 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 ZHX2Q9Y6X8 837 aa11.37□□□□□ -0.59
MTHFD1-210ENST00000555252 FSCN2O14926 492 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 PRPF4O43172 522 aaKnown RBP eCLIP11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 SFNP31947 248 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 RPS6KA3P51812 740 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 MOGSQ13724 837 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 PHLDB3Q6NSJ2 640 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 XRRA1Q6P2D8 792 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 NIM1KQ8IY84 436 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 ANKRD42Q8N9B4 389 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 FAM13CQ8NE31 585 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 RDM1Q8NG50 284 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 TEKT4Q8WW24 435 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 BICD1Q96G01 975 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 NUDCD1Q96RS6 583 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 FAM167BQ9BTA0 163 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 CCDC28BQ9BUN5 200 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 TRAIPQ9BWF2 469 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 ZNF341Q9BYN7 854 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 KIAA1683Q9H0B3 1180 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 MYLK2Q9H1R3 596 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 IKZF4Q9H2S9 585 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 EURLQ9NYK6 297 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 UVRAGQ9P2Y5 699 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 LRCH1Q9Y2L9 728 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 EMSYQ7Z589 1322 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 FAM47DPA6NHR8 397 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 DDX39AO00148 427 aaKnown RBP11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 COMTP21964 271 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 NCKAP1LP55160 1127 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 MTMR1Q13613 665 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 ARHGAP44Q17R89 818 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 EPC2Q52LR7 807 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 RNF207Q6ZRF8 634 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 ZDHHC14Q8IZN3 488 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 UHMK1Q8TAS1 419 aaKnown RBP11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 KRT35Q92764 455 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 DTNBP1Q96EV8 351 aa11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 NKX1-2Q9UD57 310 aaPredicted RBP11.36□□□□□ -0.59
MTHFD1-210ENST00000555252 FOXN3O00409 490 aaPredicted RBP11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 THAP12O43422 761 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 ACSL3O95573 720 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 GAS8O95995 478 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 GNAT1P11488 350 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 PTPN4P29074 926 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 YWHABP31946 246 aaKnown RBP11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 VHLP40337 213 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 PSMC5P62195 406 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 KRT76Q01546 638 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 OCRLQ01968 901 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 KRT17Q04695 432 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 ENPEPQ07075 957 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 DYNC1I2Q13409 638 aaKnown RBP11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 THEMIS2Q5TEJ8 643 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 SAMD1Q6SPF0 538 aaPredicted RBP11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 HAUS6Q7Z4H7 955 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 CCDC25Q86WR0 208 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 TDRPQ86YL5 185 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 SYTL5Q8TDW5 730 aaPredicted RBP11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 FAM136AQ96C01 138 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 ERP27Q96DN0 273 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 FAM210AQ96ND0 272 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 DDX23Q9BUQ8 820 aaKnown RBP11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 FAM192AQ9GZU8 254 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 SLC38A10Q9HBR0 1119 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 UBE2TQ9NPD8 197 aaPredicted RBP11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 HSPBP1Q9NZL4 362 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 COL20A1Q9P218 1284 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 WDR35Q9P2L0 1181 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 TRIM33Q9UPN9 1127 aa11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 SMG5Q9UPR3 1016 aaKnown RBP11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 CTDP1Q9Y5B0 961 aaPredicted RBP11.35□□□□□ -0.59
MTHFD1-210ENST00000555252 ANKRD63C9JTQ0 380 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 NFIBO00712 420 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 TP73O15350 636 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 DKC1O60832 514 aaKnown RBP eCLIP11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 ZBED4O75132 1171 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 ASMTLO95671 621 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 FTLP02792 175 aaPredicted RBP11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 PYGMP11217 842 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 BAG6P46379 1132 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 PTDSS1P48651 473 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms