RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 EXOSC10Q01780 885 aaKnown RBP6.8□□□□□ -1.32
VRK1-203ENST00000555067 BIRC2Q13490 618 aa6.8□□□□□ -1.32
VRK1-203ENST00000555067 Q6ZNX1 250 aa6.8□□□□□ -1.32
VRK1-203ENST00000555067 STON2Q8WXE9 905 aa6.8□□□□□ -1.32
VRK1-203ENST00000555067 MANSC1Q9H8J5 431 aa6.8□□□□□ -1.32
VRK1-203ENST00000555067 SLC23A1Q9UHI7 598 aa6.8□□□□□ -1.32
VRK1-203ENST00000555067 TCEAL9Q9UHQ7 104 aa6.8□□□□□ -1.32
VRK1-203ENST00000555067 TLK1Q9UKI8 766 aa6.8□□□□□ -1.32
VRK1-203ENST00000555067 FRMD4BQ9Y2L6 1034 aa6.8□□□□□ -1.32
VRK1-203ENST00000555067 WASHC2AQ641Q2 1341 aa6.79□□□□□ -1.32
VRK1-203ENST00000555067 PROB1E7EW31 1015 aa6.79□□□□□ -1.32
VRK1-203ENST00000555067 PRKD3O94806 890 aa6.79□□□□□ -1.32
VRK1-203ENST00000555067 OSMP13725 252 aa6.79□□□□□ -1.32
VRK1-203ENST00000555067 CNGA1P29973 690 aa6.79□□□□□ -1.32
VRK1-203ENST00000555067 HSD11B2P80365 405 aa6.79□□□□□ -1.32
VRK1-203ENST00000555067 SEPT2Q15019 361 aa6.79□□□□□ -1.32
VRK1-203ENST00000555067 RNF219Q5W0B1 726 aaPredicted RBP6.79□□□□□ -1.32
VRK1-203ENST00000555067 MICALCLQ6ZW33 695 aa6.79□□□□□ -1.32
VRK1-203ENST00000555067 WDR66Q8TBY9 1149 aa6.79□□□□□ -1.32
VRK1-203ENST00000555067 RPS6KC1Q96S38 1066 aa6.79□□□□□ -1.32
VRK1-203ENST00000555067 DUSP26Q9BV47 211 aa6.79□□□□□ -1.32
VRK1-203ENST00000555067 FBXO34Q9NWN3 711 aa6.79□□□□□ -1.32
VRK1-203ENST00000555067 ACTL7AQ9Y615 435 aa6.79□□□□□ -1.32
VRK1-203ENST00000555067 CREB3O43889 395 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 CKBP12277 381 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 SLC6A2P23975 617 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 PCSK1P29120 753 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 PLA2G5P39877 138 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 SLC6A9P48067 706 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 PTH2RP49190 550 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 MTM1Q13496 603 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 ATP2B3Q16720 1220 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 MAP9Q49MG5 647 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.78□□□□□ -1.32
VRK1-203ENST00000555067 WDR75Q8IWA0 830 aaKnown RBP6.78□□□□□ -1.32
VRK1-203ENST00000555067 BOLLQ8N9W6 283 aaKnown RBP6.78□□□□□ -1.32
VRK1-203ENST00000555067 NUP133Q8WUM0 1156 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 EVI5LQ96CN4 794 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 CASS4Q9NQ75 786 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 MTO1Q9Y2Z2 717 aaKnown RBP6.78□□□□□ -1.32
VRK1-203ENST00000555067 PCDHGA2Q9Y5H1 932 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 GPR45Q9Y5Y3 372 aa6.78□□□□□ -1.32
VRK1-203ENST00000555067 MYADML2A6NDP7 307 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 K7ESF4 209 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 C1RP00736 705 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 ZNF169Q14929 603 aaPredicted RBP6.77□□□□□ -1.33
VRK1-203ENST00000555067 CYP2A13Q16696 494 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 UBE3BQ7Z3V4 1068 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 DDX42Q86XP3 938 aaKnown RBP eCLIP6.77□□□□□ -1.33
VRK1-203ENST00000555067 COLGALT2Q8IYK4 626 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 FITM2Q8N6M3 262 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 CCHCR1Q8TD31 782 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 SSH1Q8WYL5 1049 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 MED15Q96RN5 788 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 PNKPQ96T60 521 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 LRFN3Q9BTN0 628 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 RSAD1Q9HA92 442 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 LRIT1Q9P2V4 623 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 USP25Q9UHP3 1055 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 DMTF1Q9Y222 760 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 AATKQ6ZMQ8 1374 aa6.77□□□□□ -1.33
VRK1-203ENST00000555067 COL3A1P02461 1466 aaPredicted RBP6.77□□□□□ -1.33
VRK1-203ENST00000555067 ERN1O75460 977 aaKnown RBP6.76□□□□□ -1.33
VRK1-203ENST00000555067 VAV2P52735 878 aa6.76□□□□□ -1.33
VRK1-203ENST00000555067 ERVK-21P61565 698 aa6.76□□□□□ -1.33
VRK1-203ENST00000555067 FAM50AQ14320 339 aaKnown RBP6.76□□□□□ -1.33
VRK1-203ENST00000555067 LHFPL2Q6ZUX7 228 aa6.76□□□□□ -1.33
VRK1-203ENST00000555067 ANKS1AQ92625 1134 aa6.76□□□□□ -1.33
VRK1-203ENST00000555067 MYOCQ99972 504 aa6.76□□□□□ -1.33
VRK1-203ENST00000555067 C7orf25Q9BPX7 421 aa6.76□□□□□ -1.33
VRK1-203ENST00000555067 ZNF277Q9NRM2 450 aaPredicted RBP6.76□□□□□ -1.33
VRK1-203ENST00000555067 DNM3Q9UQ16 869 aa6.76□□□□□ -1.33
VRK1-203ENST00000555067 PRSS23O95084 383 aa6.75□□□□□ -1.33
VRK1-203ENST00000555067 AMY1AP04745 511 aa6.75□□□□□ -1.33
VRK1-203ENST00000555067 AGXTP21549 392 aa6.75□□□□□ -1.33
VRK1-203ENST00000555067 SIM1P81133 766 aaPredicted RBP6.75□□□□□ -1.33
VRK1-203ENST00000555067 MRPS35P82673 323 aaKnown RBP6.75□□□□□ -1.33
VRK1-203ENST00000555067 FOXF2Q12947 444 aa6.75□□□□□ -1.33
VRK1-203ENST00000555067 NFE2Q16621 373 aaPredicted RBP6.75□□□□□ -1.33
VRK1-203ENST00000555067 DACT2Q5SW24 774 aa6.75□□□□□ -1.33
VRK1-203ENST00000555067 TSHZ1Q6ZSZ6 1077 aa6.75□□□□□ -1.33
VRK1-203ENST00000555067 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.75□□□□□ -1.33
VRK1-203ENST00000555067 NACC2Q96BF6 587 aa6.75□□□□□ -1.33
VRK1-203ENST00000555067 AIFM2Q9BRQ8 373 aa6.75□□□□□ -1.33
VRK1-203ENST00000555067 UNKLQ9H9P5 680 aaKnown RBP6.75□□□□□ -1.33
VRK1-203ENST00000555067 RUVBL1Q9Y265 456 aaKnown RBP6.75□□□□□ -1.33
VRK1-203ENST00000555067 CCDC78A2IDD5 438 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 ALDH1L1O75891 902 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 DDCP20711 480 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 GNALP38405 381 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 RARRES1P49788 294 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 ATP8B2P98198 1209 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 CREMQ03060 361 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 UBE4AQ14139 1066 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 AMOTL1Q8IY63 956 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 LNX2Q8N448 690 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 NLGN4YQ8NFZ3 816 aaPredicted RBP6.74□□□□□ -1.33
VRK1-203ENST00000555067 OR2I1PQ8NGU4 316 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 ACTRT2Q8TDY3 377 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 COG1Q8WTW3 980 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms