RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 STKLD1Q8NE28 680 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 MCPH1Q8NEM0 835 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 SERHL2Q9H4I8 314 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 SERHLQ9NQF3 203 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 POLE3Q9NRF9 147 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 ABI2Q9NYB9 513 aaPredicted RBP7.21□□□□□ -1.26
SYNE2-216ENST00000555002 TTLL13PA6NNM8 815 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 TCP11X1B4DZS4 312 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 TBXAS1P24557 533 aaPredicted RBP7.21□□□□□ -1.26
SYNE2-216ENST00000555002 GPC5P78333 572 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 SHCBP1Q8NEM2 672 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 PIK3R5Q8WYR1 880 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 THAP11Q96EK4 314 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 NARS2Q96I59 477 aaKnown RBP7.21□□□□□ -1.26
SYNE2-216ENST00000555002 FAM96AQ9H5X1 160 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 IQCMA0A1B0GVH7 501 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 BIRC5O15392 142 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 RD3Q7Z3Z2 195 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 CALML6Q8TD86 181 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 PCDHB6Q9Y5E3 794 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 LDHAP00338 332 aaKnown RBP7.21□□□□□ -1.26
SYNE2-216ENST00000555002 C4BPBP20851 252 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 ST13P50502 369 aaKnown RBP7.21□□□□□ -1.26
SYNE2-216ENST00000555002 GYS2P54840 703 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 ZNF445P59923 1031 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 RHOT2Q8IXI1 618 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 WNK4Q96J92 1243 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 SH3GL1Q99961 368 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 INTS2Q9H0H0 1204 aaKnown RBP7.21□□□□□ -1.26
SYNE2-216ENST00000555002 NPHS2Q9NP85 383 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 IARS2Q9NSE4 1012 aaKnown RBP7.21□□□□□ -1.26
SYNE2-216ENST00000555002 PIM2Q9P1W9 311 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 ASAP1Q9ULH1 1129 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 POTECB2RU33 542 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 RGS5O15539 181 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 HOXB7P09629 217 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 GPC1P35052 558 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 AVPR1AP37288 418 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 RBBP4Q09028 425 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 IZUMO3Q5VZ72 239 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 CAPRIN2Q6IMN6 1127 aaKnown RBP7.21□□□□□ -1.26
SYNE2-216ENST00000555002 POLG2Q9UHN1 485 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 PCCAP05165 728 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 PCP11498 1178 aaKnown RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 ACTR2P61160 394 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 GPSM2P81274 684 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 POU4F1Q01851 419 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 PAN2Q504Q3 1202 aaKnown RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 XXYLT1Q8NBI6 393 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 TNIP2Q8NFZ5 429 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 ADI1Q9BV57 179 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 C20orf96Q9NUD7 363 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 SYBUQ9NX95 663 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 PIPSLA2A3N6 862 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 STAU1O95793 577 aaKnown RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 LRRC63Q05C16 580 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 COX10Q12887 443 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 COASYQ13057 564 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 TCEA2Q15560 299 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 HIST2H2ACQ16777 129 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 TCEAL5Q5H9L2 206 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 HIST2H2AA3Q6FI13 130 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 ALKBH5Q6P6C2 394 aaKnown RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 NEK10Q6ZWH5 1172 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 APOBEC3FQ8IUX4 373 aaKnown RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 CATSPER1Q8NEC5 780 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 CHAMP1Q96JM3 812 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 TBC1D23Q9NUY8 699 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 LCMT1Q9UIC8 334 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 SLC30A1Q9Y6M5 507 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 ARID1BQ8NFD5 2236 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 KIAA0586Q9BVV6 1533 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 HNRNPRO43390 633 aaKnown RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 NUDT14O95848 222 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 CAV1Q03135 178 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 BNIPLQ7Z465 357 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 LONP2Q86WA8 852 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 L3MBTL3Q96JM7 780 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 C2orf40Q9H1Z8 148 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 CARD9Q9H257 536 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 SLC39A10Q9ULF5 831 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 IPPQ9Y573 584 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 PARNO95453 639 aaKnown RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 POU1F1P28069 291 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 RGS4P49798 205 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 FUT11Q495W5 492 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 SNX30Q5VWJ9 437 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 CNBD2Q96M20 576 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 SPATA2Q9UM82 520 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 PHLPP2Q6ZVD8 1323 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 ENO2P09104 434 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 CDC25BP30305 580 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 CRKP46108 304 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 LAYNQ6UX15 382 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 MED8Q96G25 268 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 OSBPL6Q9BZF3 934 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 NDST4Q9H3R1 872 aa7.2□□□□□ -1.26
SYNE2-216ENST00000555002 RBAKQ9NYW8 714 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-216ENST00000555002 STON1Q9Y6Q2 735 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms