RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 TUBB4BP68371 445 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 SGSM1Q2NKQ1 1148 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 MAP3K21Q5TCX8 1036 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 SESTD1Q86VW0 696 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 THNSL1Q8IYQ7 743 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 WHAMMQ8TF30 809 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 NLRP7Q8WX94 980 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 TAF4BQ92750 862 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 RPGRIP1Q96KN7 1286 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 PACSIN2Q9UNF0 486 aaPredicted RBP9.54□□□□□ -0.88
TDP1-210ENST00000554976 PCDHB2Q9Y5E7 798 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 FGFR4P22455 802 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 PSMC4P43686 418 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 CLCN6P51797 869 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 CDC42EP1Q00587 391 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 PRKCZQ05513 592 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 MGAT3Q09327 533 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 KIZQ2M2Z5 673 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 DCAF4L1Q3SXM0 396 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 WDR44Q5JSH3 913 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 WDR93Q6P2C0 686 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 PIAS4Q8N2W9 510 aaPredicted RBP9.54□□□□□ -0.88
TDP1-210ENST00000554976 SNX27Q96L92 541 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 PARD6BQ9BYG5 372 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 NIF3L1Q9GZT8 377 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 YY1AP1Q9H869 796 aa9.54□□□□□ -0.88
TDP1-210ENST00000554976 ABT1Q9ULW3 272 aaKnown RBP9.54□□□□□ -0.88
TDP1-210ENST00000554976 CTAGE15A4D2H0 777 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 TMCO5BA8MYB1 307 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 CTAGE8P0CG41 777 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 CST5P28325 142 aaPredicted RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 NOMO3P69849 1222 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 CKAP4Q07065 602 aaKnown RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 CACNB2Q08289 660 aaPredicted RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 BIRC3Q13489 604 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 CTAGE6Q86UF2 777 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 CTAGE4Q8IX94 777 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 RHOT2Q8IXI1 618 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 RBBP8NLQ8NC74 664 aaPredicted RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 UBXN4Q92575 508 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 WNT8BQ93098 351 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 KATNAL1Q9BW62 490 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 EIF2AQ9BY44 585 aaKnown RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 RPF1Q9H9Y2 349 aaKnown RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 GPBP1L1Q9HC44 474 aaPredicted RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 SMARCAL1Q9NZC9 954 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 GTF3C4Q9UKN8 822 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 TTC7AQ9ULT0 858 aaPredicted RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 DERAQ9Y315 318 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 C2CD2Q9Y426 696 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 HTTP42858 3142 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 PATJQ8NI35 1801 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 ECM2O94769 699 aaPredicted RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 CYP2C9P11712 490 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 FLT3LGP49771 235 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 GPC5P78333 572 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 SNX17Q15036 470 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 IFI16Q16666 785 aaKnown RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 RPAINQ86UA6 219 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 NT5DC4Q86YG4 428 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 MCOLN2Q8IZK6 566 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 ACTRT1Q8TDG2 376 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 MS4A14Q96JA4 679 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 AVENQ9NQS1 362 aaPredicted RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 CNTN3Q9P232 1028 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 RNF14Q9UBS8 474 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 GTF2IRD1Q9UHL9 959 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 PCDHGC3Q9UN70 934 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 GRIN2DO15399 1336 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 TARSL2A2RTX5 802 aaKnown RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 C17orf102A2RUQ5 167 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 SEPT4O43236 478 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 KPNA6O60684 536 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 MYL3P08590 195 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 CXCR5P32302 372 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 C2orf54Q08AI8 447 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 PHF13Q86YI8 300 aaPredicted RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 REM2Q8IYK8 340 aaPredicted RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 NME8Q8N427 588 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 WDTC1Q8N5D0 677 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 SPATA4Q8NEY3 305 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 HNRNPLLQ8WVV9 542 aaKnown RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 DNAJB3Q8WWF6 145 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 CTNNBL1Q8WYA6 563 aaPredicted RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 CAPZA3Q96KX2 299 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 ZMAT2Q96NC0 199 aaKnown RBP9.53□□□□□ -0.88
TDP1-210ENST00000554976 RNF186Q9NXI6 227 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 POLIQ9UNA4 740 aa9.53□□□□□ -0.88
TDP1-210ENST00000554976 TANC1Q9C0D5 1861 aa9.52□□□□□ -0.88
TDP1-210ENST00000554976 CLGNO14967 610 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 TOMM70O94826 608 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 ABCB4P21439 1286 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 CCND3P30281 292 aaPredicted RBP9.52□□□□□ -0.89
TDP1-210ENST00000554976 AXLP30530 894 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 ATICP31939 592 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 OSTNP61366 133 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 NOGQ13253 232 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 TEX35Q5T0J7 233 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 SLC27A1Q6PCB7 646 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 LIMS2Q7Z4I7 341 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms