RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SERPINB13Q9UIV8 391 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 INTUQ9ULD6 942 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 HS3ST4Q9Y661 456 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 CDK13Q14004 1512 aaKnown RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 STRCP1A6NGW2 1772 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 COL4A3Q01955 1670 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 ALKQ9UM73 1620 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 CEP170BQ9Y4F5 1589 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 UGGT2Q9NYU1 1516 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 ARHGEF12Q9NZN5 1544 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 CCDC154A6NI56 674 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 GOLGA6L6A8MZA4 724 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 KIF3BO15066 747 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 ZNF185O15231 689 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 ADCY6O43306 1168 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 HTRA2O43464 458 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 AKR1B10O60218 316 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 TOM1O60784 492 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 PRAMEF4O60810 478 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 PHF2O75151 1096 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 OFD1O75665 1012 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 IPO13O94829 963 aaKnown RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 HSPA6P17066 643 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 PDCP20941 246 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 LPOP22079 712 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 CTSSP25774 331 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 PPP3CAQ08209 521 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 NOMO1Q15155 1222 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 MINDY4Q4G0A6 757 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 C19orf54Q5BKX5 351 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 GJC2Q5T442 439 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 IFIT1BQ5T764 474 aaKnown RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 EPM2AIP1Q7L775 607 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 GPRIN1Q7Z2K8 1008 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 APBB1IPQ7Z5R6 666 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 SNX33Q8WV41 574 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 DPF2Q92785 391 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 IL17RAQ96F46 866 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 CEP95Q96GE4 821 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 EPC1Q9H2F5 836 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 NMRK2Q9NPI5 230 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 LIMCH1Q9UPQ0 1083 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 MYO5CQ9NQX4 1742 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 ATP10BO94823 1461 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 C9orf84Q5VXU9 1444 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 SCAPERQ9BY12 1400 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 KIF14Q15058 1648 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 CFAP74Q9C0B2 1584 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 DIP2CQ9Y2E4 1556 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 NEO1Q92859 1461 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 CENPVL1A0A0U1RR11 272 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 FAM171A2A8MVW0 826 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 AP1G1O43747 822 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 RAMP2O60895 175 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 ITGA10O75578 1167 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 RHOBTB3O94955 611 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 EDNRBP24530 442 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 LMO1P25800 156 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 ADSLP30566 484 aaPredicted RBP1.95□□□□□ -2.1
PRPF39-208ENST00000554785 GZMKP49863 264 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 DUSP2Q05923 314 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 MGAT2Q10469 447 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 VPS72Q15906 364 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 DCAF17Q5H9S7 520 aaPredicted RBP1.95□□□□□ -2.1
PRPF39-208ENST00000554785 MFSD14BQ5SR56 506 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 METRNLQ641Q3 311 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 USP45Q70EL2 814 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 MIGA2Q7L4E1 593 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 CATIPQ7Z7H3 387 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 PRR18Q8N4B5 295 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 AFAP1Q8N556 730 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 RNF169Q8NCN4 708 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 REPS2Q8NFH8 660 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 FBXO18Q8NFZ0 1043 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 SLC35B2Q8TB61 432 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 SLC35G2Q8TBE7 412 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 HPS3Q969F9 1004 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 HDAC10Q969S8 669 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 NEU1Q99519 415 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 MAP3K14Q99558 947 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 C7orf25Q9BPX7 421 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 GTPBP4Q9BZE4 634 aaKnown RBP1.95□□□□□ -2.1
PRPF39-208ENST00000554785 KCNH6Q9H252 994 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 ANLNQ9NQW6 1124 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 FZD1Q9UP38 647 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 CHST2Q9Y4C5 530 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 IPPQ9Y573 584 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 FHOD3Q2V2M9 1422 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 SETBP1Q9Y6X0 1596 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 ARHGAP5Q13017 1502 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 ZMYM4Q5VZL5 1548 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 ROBO1Q9Y6N7 1651 aa1.95□□□□□ -2.1
PRPF39-208ENST00000554785 RAPGEF2Q9Y4G8 1499 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 RNF17Q9BXT8 1623 aaKnown RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 GRID2IPA4D2P6 1211 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 SERINC4A6NH21 518 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 VSTM5A8MXK1 200 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 ERC2O15083 957 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PRC1O43663 620 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms