RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 C12orf60Q5U649 245 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 EEF1DP3Q658K8 133 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 RPTNQ6XPR3 784 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 DEFB128Q7Z7B8 93 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 TLK2Q86UE8 772 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 SDR42E1Q8WUS8 393 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 FTOQ9C0B1 505 aaKnown RBP eCLIP5.76□□□□□ -1.49
ATXN3-228ENST00000554592 UBE2ZQ9H832 354 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-228ENST00000554592 GPRC5CQ9NQ84 441 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 BACE2Q9Y5Z0 518 aa5.76□□□□□ -1.49
ATXN3-228ENST00000554592 ASTN1O14525 1302 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 ZNF532Q9HCE3 1301 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 ARNTLO00327 626 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 DCXO43602 365 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 BCAR3O75815 825 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 BAIAP3O94812 1187 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 IQCF3P0C7M6 154 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 CYP2C9P11712 490 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 NCLP19338 710 aaKnown RBP5.75□□□□□ -1.49
ATXN3-228ENST00000554592 ARL4AP40617 200 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 MASP1P48740 699 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 CDR1P51861 262 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 EPHB3P54753 998 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 PSMC6P62333 389 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 FNDC3BQ53EP0 1204 aaKnown RBP5.75□□□□□ -1.49
ATXN3-228ENST00000554592 FBLN7Q53RD9 439 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 RNF187Q5TA31 235 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-228ENST00000554592 LCE4AQ5TA78 99 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 DHX37Q8IY37 1157 aaKnown RBP5.75□□□□□ -1.49
ATXN3-228ENST00000554592 LCORLQ8N3X6 602 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 FAM133AQ8N9E0 248 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-228ENST00000554592 FRS2Q8WU20 508 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 NINJ1Q92982 152 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 GPATCH3Q96I76 525 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 NUP88Q99567 741 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-228ENST00000554592 MRPL4Q9BYD3 311 aaKnown RBP5.75□□□□□ -1.49
ATXN3-228ENST00000554592 SLC38A10Q9HBR0 1119 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 RAVER2Q9HCJ3 691 aaKnown RBP5.75□□□□□ -1.49
ATXN3-228ENST00000554592 EPB41L4AQ9HCS5 686 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-228ENST00000554592 TRMT13Q9NUP7 481 aaKnown RBP5.75□□□□□ -1.49
ATXN3-228ENST00000554592 NYAP2Q9P242 653 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 FBLN5Q9UBX5 448 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 FEM1BQ9UK73 627 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 PLAAQ9Y263 795 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 ZNF236Q9UL36 1845 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 MYH13Q9UKX3 1938 aa5.75□□□□□ -1.49
ATXN3-228ENST00000554592 TNKSO95271 1327 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 TCRBV5S4A2TA0A5A2 114 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 ABLIM1O14639 778 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 PRKAB2O43741 272 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 KPNA6O60684 536 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 NDUFB10O96000 172 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 DBHP09172 617 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 TRIM27P14373 513 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 IL9P15248 144 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 KCNA5P22460 613 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 ERVK-21P61565 698 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 CNTN2Q02246 1040 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 BFSP2Q13515 415 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 DUSP28Q4G0W2 176 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 TM4SF20Q53R12 229 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 BRDTQ58F21 947 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-228ENST00000554592 TRIM61Q5EBN2 209 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 TAPT1Q6NXT6 567 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 USP53Q70EK8 1073 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 FILIP1Q7Z7B0 1213 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 AACSQ86V21 672 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 JAMLQ86YT9 394 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 SLC7A14Q8TBB6 771 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.74□□□□□ -1.49
ATXN3-228ENST00000554592 TGS1Q96RS0 853 aaKnown RBP5.74□□□□□ -1.49
ATXN3-228ENST00000554592 RAD9AQ99638 391 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 MTG1Q9BT17 334 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-228ENST00000554592 UPF3BQ9BZI7 483 aaKnown RBP5.74□□□□□ -1.49
ATXN3-228ENST00000554592 ACAD9Q9H845 621 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 ARMT1Q9H993 441 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 PDGFCQ9NRA1 345 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 CTNNA3Q9UI47 895 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 TMEFF2Q9UIK5 374 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-228ENST00000554592 FAM50BQ9Y247 325 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 PRKAB1Q9Y478 270 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 SIPA1L1O43166 1804 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 ZNF536O15090 1300 aa5.74□□□□□ -1.49
ATXN3-228ENST00000554592 BDP1A6H8Y1 2624 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 CYP2D7A0A087X1C5 515 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 NUDT19A8MXV4 375 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 GOLIM4O00461 696 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 N4BP3O15049 544 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 DNAJC6O75061 913 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 MBD4O95243 580 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 PARNO95453 639 aaKnown RBP5.73□□□□□ -1.49
ATXN3-228ENST00000554592 MYL3P08590 195 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 PLS3P13797 630 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 SDSP20132 328 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 SEPHS1P49903 392 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 CPT1AP50416 773 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 GABREP78334 506 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 PURAQ00577 322 aaKnown RBP5.73□□□□□ -1.49
ATXN3-228ENST00000554592 SSPNQ14714 243 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms