RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ZNF236Q9UL36 1845 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 PFASO15067 1338 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 RPTORQ8N122 1335 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 KIAA1217Q5T5P2 1943 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 CCDC194A0A1B0GVG4 234 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 C2orf71A6NGG8 1288 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 AGRPO00253 132 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 EFEMP2O95967 443 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 PGK2P07205 417 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 GSTM1P09488 218 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 FGFR1P11362 822 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 FCER1AP12319 257 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 RPL10P27635 214 aaKnown RBP7.12□□□□□ -1.27
SCFD1-212ENST00000554486 ADORA2AP29274 412 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 MAPK4P31152 587 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 SREBF1P36956 1147 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 GRB14Q14449 540 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 HSP90AA2PQ14568 343 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-212ENST00000554486 NONOQ15233 471 aaKnown RBP eCLIP7.12□□□□□ -1.27
SCFD1-212ENST00000554486 INF2Q27J81 1249 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 PRSS53Q2L4Q9 553 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 WDR78Q5VTH9 848 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 MCTP2Q6DN12 878 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 GPR142Q7Z601 462 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 PLEKHH3Q7Z736 793 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 ABRAQ8N0Z2 381 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 ANKRD35Q8N283 1001 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 FAM133AQ8N9E0 248 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 IL31RAQ8NI17 732 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 NPLOC4Q8TAT6 608 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 TBCKQ8TEA7 893 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 SH3TC2Q8TF17 1288 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 THAP3Q8WTV1 239 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-212ENST00000554486 FRS2Q8WU20 508 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 TNPO1Q92973 898 aaKnown RBP7.12□□□□□ -1.27
SCFD1-212ENST00000554486 KIRREL1Q96J84 757 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 KRTAP4-12Q9BQ66 201 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 AARSD1Q9BTE6 412 aaKnown RBP7.12□□□□□ -1.27
SCFD1-212ENST00000554486 PXMP2Q9NR77 195 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 SAGE1Q9NXZ1 904 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 SLAMF8Q9P0V8 285 aa7.12□□□□□ -1.27
SCFD1-212ENST00000554486 LRRC37A2A6NM11 1700 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 SLC15A5A6NIM6 579 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 NOTOA8MTQ0 251 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 STRNO43815 780 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 FARP2O94887 1054 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-212ENST00000554486 THBDP07204 575 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 CYP3A4P08684 503 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 HOXC12P31275 282 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 NOP2P46087 812 aaKnown RBP7.11□□□□□ -1.27
SCFD1-212ENST00000554486 UBXN2AP68543 259 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 SP3Q02447 781 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 MAP2K1Q02750 393 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-212ENST00000554486 KCTD2Q14681 263 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 LONRF2Q1L5Z9 754 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 FAM209AQ5JX71 171 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 SLC35F1Q5T1Q4 408 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 NEK8Q86SG6 692 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 CCAR1Q8IX12 1150 aaKnown RBP7.11□□□□□ -1.27
SCFD1-212ENST00000554486 TMEM145Q8NBT3 493 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 USP6NLQ92738 828 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 KISS1RQ969F8 398 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-212ENST00000554486 USP28Q96RU2 1077 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 RMDN3Q96TC7 470 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 PDCD2LQ9BRP1 358 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 IER2Q9BTL4 223 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 FTOQ9C0B1 505 aaKnown RBP eCLIP7.11□□□□□ -1.27
SCFD1-212ENST00000554486 ARHGAP39Q9C0H5 1083 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 TMEFF2Q9UIK5 374 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-212ENST00000554486 TMEM59LQ9UK28 342 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 GJD2Q9UKL4 321 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 PCDHB6Q9Y5E3 794 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 BACE2Q9Y5Z0 518 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 PTCH2Q9Y6C5 1203 aa7.11□□□□□ -1.27
SCFD1-212ENST00000554486 DDX49Q9Y6V7 483 aaKnown RBP7.11□□□□□ -1.27
SCFD1-212ENST00000554486 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-212ENST00000554486 CASP8AP2Q9UKL3 1982 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 CYP3A7-CYP3A51PA0A087WV96 503 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 TRAV20A0A0B4J274 112 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 TLDC2A0PJX2 215 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 PRODHO43272 600 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 BAG4O95429 457 aaKnown RBP7.1□□□□□ -1.27
SCFD1-212ENST00000554486 TDP2O95551 362 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 GLI1P08151 1106 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 PABPC1P11940 636 aaKnown RBP7.1□□□□□ -1.27
SCFD1-212ENST00000554486 CYP3A7P24462 503 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 EDNRBP24530 442 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 L1CAMP32004 1257 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 CIITAP33076 1130 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 PSMC4P43686 418 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 TRAPPC10P48553 1259 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 ALDH5A1P51649 535 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-212ENST00000554486 MRPS9P82933 396 aaKnown RBP7.1□□□□□ -1.27
SCFD1-212ENST00000554486 LACTBP83111 547 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-212ENST00000554486 PGM5Q15124 567 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 PTPAQ15257 358 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 ZNF174Q15697 407 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 RILPL1Q5EBL4 403 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 TTC38Q5R3I4 469 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 ARHGEF16Q5VV41 709 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms