RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.65□□□□□ -1.34
ATXN3-226ENST00000554350 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-226ENST00000554350 FSD2A1L4K1 749 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 CYSRT1A8MQ03 144 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 NKRFO15226 690 aaKnown RBP eCLIP6.64□□□□□ -1.35
ATXN3-226ENST00000554350 UBTFL1P0CB47 393 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-226ENST00000554350 ERVFRD-1P60508 538 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 MRPL58Q14197 206 aaKnown RBP6.64□□□□□ -1.35
ATXN3-226ENST00000554350 PAN2Q504Q3 1202 aaKnown RBP6.64□□□□□ -1.35
ATXN3-226ENST00000554350 ZNF385BQ569K4 471 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 PLEKHG4Q58EX7 1191 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 IL31Q6EBC2 164 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 CENPQQ7L2Z9 268 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-226ENST00000554350 CHST3Q7LGC8 479 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 NLRC3Q7RTR2 1065 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 LURAP1LQ8IV03 231 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 S1PR5Q9H228 398 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 KANSL2Q9H9L4 492 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 SLC38A10Q9HBR0 1119 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 DBR1Q9UK59 544 aaKnown RBP6.64□□□□□ -1.35
ATXN3-226ENST00000554350 NAV1Q8NEY1 1877 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 MYH8P13535 1937 aa6.64□□□□□ -1.35
ATXN3-226ENST00000554350 SRRM3A6NNA2 597 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 MEIS3P2A8K0S8 358 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 CLEC3AO75596 197 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 NDUFB10O96000 172 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 WEE2P0C1S8 567 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 LINC00271P0C7V0 271 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 TXNP10599 105 aaKnown RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 NME1P15531 152 aaKnown RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 IBSPP21815 317 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 CDR1P51861 262 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 OAZ1P54368 228 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 SHC2P98077 582 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 RAD51AP2Q09MP3 1159 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 SLC14A2Q15849 920 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 DUSP6Q16828 381 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 TRIM71Q2Q1W2 868 aaKnown RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 HSF5Q4G112 596 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 SEZ6Q53EL9 994 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 CCDC158Q5M9N0 1113 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 SPOUT1Q5T280 376 aaKnown RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 TCERG1LQ5VWI1 586 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 SYCE2Q6PIF2 218 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 SESTD1Q86VW0 696 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 REXO1Q8N1G1 1221 aaKnown RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 LRRC47Q8N1G4 583 aaKnown RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 ATP8B4Q8TF62 1192 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 AFG1LQ8WV93 481 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 DDX1Q92499 740 aaKnown RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 P2RX5Q93086 422 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 CHMP4CQ96CF2 233 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 FCRL2Q96LA5 508 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 SIGLEC10Q96LC7 697 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 CCDC17Q96LX7 622 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 NECTIN4Q96NY8 510 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 CDCA3Q99618 268 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 CRNKL1Q9BZJ0 848 aaKnown RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 TBC1D17Q9HA65 648 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 CHST7Q9NS84 486 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 ERVK13-1Q9NX77 482 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 ANKFY1Q9P2R3 1169 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 FEM1BQ9UK73 627 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 RAB23Q9ULC3 237 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 CA14Q9ULX7 337 aa6.63□□□□□ -1.35
ATXN3-226ENST00000554350 GPR55Q9Y2T6 319 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 MRPL42Q9Y6G3 142 aaKnown RBP6.63□□□□□ -1.35
ATXN3-226ENST00000554350 IL16Q14005 1332 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 CEP295Q9C0D2 2601 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 F5H6K3 240 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 TAF4O00268 1085 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 TNFRSF10CO14798 259 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 N4BP3O15049 544 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 NCLP19338 710 aaKnown RBP6.62□□□□□ -1.35
ATXN3-226ENST00000554350 CASTP20810 708 aaKnown RBP6.62□□□□□ -1.35
ATXN3-226ENST00000554350 CCNFP41002 786 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 ALDH5A1P51649 535 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-226ENST00000554350 CSTF1Q05048 431 aaKnown RBP6.62□□□□□ -1.35
ATXN3-226ENST00000554350 KLRC3Q07444 240 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 TDGQ13569 410 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 LPAL2Q16609 132 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 KIAA0753Q2KHM9 967 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 NAALADL2Q58DX5 795 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 PLPP4Q5VZY2 271 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 GK5Q6ZS86 529 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 SLCO6A1Q86UG4 719 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 TMEFF1Q8IYR6 380 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 ZDHHC14Q8IZN3 488 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 TMEM52Q8NDY8 209 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 SCFD2Q8WU76 684 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 SDR42E1Q8WUS8 393 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 KATNAL1Q9BW62 490 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 XYLT2Q9H1B5 865 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 ZCCHC4Q9H5U6 513 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 CYP26B1Q9NR63 512 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 SPATA6Q9NWH7 488 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-226ENST00000554350 CYP39A1Q9NYL5 469 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 KLHL14Q9P2G3 628 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 TNFRSF10DQ9UBN6 386 aa6.62□□□□□ -1.35
ATXN3-226ENST00000554350 ADD3Q9UEY8 706 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms