RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 CORO1BQ9BR76 489 aa12.68□□□□□ -0.38
TUBB3-204ENST00000554116 LRRC3Q9BY71 257 aa12.68□□□□□ -0.38
TUBB3-204ENST00000554116 CHRDQ9H2X0 955 aa12.68□□□□□ -0.38
TUBB3-204ENST00000554116 ZNF334Q9HCZ1 680 aaPredicted RBP12.68□□□□□ -0.38
TUBB3-204ENST00000554116 FBXL5Q9UKA1 691 aa12.68□□□□□ -0.38
TUBB3-204ENST00000554116 USP18Q9UMW8 372 aa12.68□□□□□ -0.38
TUBB3-204ENST00000554116 RALGAPA1Q6GYQ0 2036 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 ARHGEF35A5YM69 484 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 PODXLO00592 558 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 MICAL2O94851 1124 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 KCNE1P15382 129 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 GJA1P17302 382 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 VIPR2P41587 438 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 NPTX2P47972 431 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 EFNA5P52803 228 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 EPHA5P54756 1037 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 OSTNP61366 133 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 DMWDQ09019 674 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 NBR1Q14596 966 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 DNASE1L2Q92874 299 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 TBC1D32Q96NH3 1257 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 LRRC3BQ96PB8 259 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 BHMT2Q9H2M3 363 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 FOXP1Q9H334 677 aaPredicted RBP12.67□□□□□ -0.38
TUBB3-204ENST00000554116 CRISPLD1Q9H336 500 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 TRPV5Q9NQA5 729 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 C2orf42Q9NWW7 574 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 ARHGAP28Q9P2N2 729 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 GMEB2Q9UKD1 530 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 NDRG2Q9UN36 371 aaKnown RBP12.67□□□□□ -0.38
TUBB3-204ENST00000554116 INSL5Q9Y5Q6 135 aa12.67□□□□□ -0.38
TUBB3-204ENST00000554116 ANK1P16157 1881 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 KIF26AQ9ULI4 1882 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-204ENST00000554116 DCDC2BA2VCK2 349 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 OR52Z1P0C646 297 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 CHRNB1P11230 501 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 PPP2R5AQ15172 486 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 IL17AQ16552 155 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 TMEM132AQ24JP5 1023 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 KCNK18Q7Z418 384 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 TMX3Q96JJ7 454 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 SUSD3Q96L08 255 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 TARS2Q9BW92 718 aaKnown RBP12.66□□□□□ -0.38
TUBB3-204ENST00000554116 FAM126AQ9BYI3 521 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-204ENST00000554116 HAPLN2Q9GZV7 340 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 LMAN1LQ9HAT1 526 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 TRPV4Q9HBA0 871 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 CYP4F11Q9HBI6 524 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 ZFP14Q9HCL3 533 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 CNTN3Q9P232 1028 aa12.66□□□□□ -0.38
TUBB3-204ENST00000554116 NBEAQ8NFP9 2946 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 PP2D1A8MPX8 630 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 E9PMD0 336 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 K7ERI5 159 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 SYN3O14994 580 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 NCAM2O15394 837 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 HRO43593 1189 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 TRAPPC3O43617 180 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 CD2BP2O95400 341 aaKnown RBP12.65□□□□□ -0.38
TUBB3-204ENST00000554116 LRG1P02750 347 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 MUTP22033 750 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 GDI1P31150 447 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 MCM2P49736 904 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 TOB1P50616 345 aaPredicted RBP12.65□□□□□ -0.38
TUBB3-204ENST00000554116 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
TUBB3-204ENST00000554116 ARPP19P56211 112 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 PEX3P56589 373 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 SATB1Q01826 763 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 LPAL2Q16609 132 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 SLC10A6Q3KNW5 377 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 SEZ6Q53EL9 994 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 TPGS2Q68CL5 300 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 RNF19BQ6ZMZ0 732 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 BEST2Q8NFU1 509 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 SHKBP1Q8TBC3 707 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 KIFAP3Q92845 792 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 SMARCD2Q92925 531 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 MMTAG2Q9BU76 263 aaKnown RBP12.65□□□□□ -0.38
TUBB3-204ENST00000554116 MKNK1Q9BUB5 465 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 RUSC1Q9BVN2 902 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 TRMT61BQ9BVS5 477 aaKnown RBP12.65□□□□□ -0.38
TUBB3-204ENST00000554116 DNAJC25Q9H1X3 360 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 TMEM134Q9H6X4 195 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 BRD9Q9H8M2 597 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 KIAA1024Q9UPX6 916 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 KIF3AQ9Y496 699 aa12.65□□□□□ -0.38
TUBB3-204ENST00000554116 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.65□□□□□ -0.38
TUBB3-204ENST00000554116 DSPP15924 2871 aaKnown RBP12.65□□□□□ -0.38
TUBB3-204ENST00000554116 FAM208BQ5VWN6 2430 aa12.64□□□□□ -0.39
TUBB3-204ENST00000554116 DMXL2Q8TDJ6 3036 aa12.64□□□□□ -0.39
TUBB3-204ENST00000554116 MYH11P35749 1972 aa12.64□□□□□ -0.39
TUBB3-204ENST00000554116 K7ESF4 209 aa12.64□□□□□ -0.39
TUBB3-204ENST00000554116 PRRG1O14668 218 aa12.64□□□□□ -0.39
TUBB3-204ENST00000554116 PSMC3P17980 439 aa12.64□□□□□ -0.39
TUBB3-204ENST00000554116 CCT6AP40227 531 aaKnown RBP12.64□□□□□ -0.39
TUBB3-204ENST00000554116 SPEM2Q0P670 501 aa12.64□□□□□ -0.39
TUBB3-204ENST00000554116 TWF1Q12792 350 aa12.64□□□□□ -0.39
TUBB3-204ENST00000554116 SRSF5Q13243 272 aaKnown RBP12.64□□□□□ -0.39
TUBB3-204ENST00000554116 ZNF568Q3ZCX4 644 aa12.64□□□□□ -0.39
TUBB3-204ENST00000554116 TXNDC11Q6PKC3 985 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms