RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CCT2P78371 535 aaKnown RBP3.33□□□□□ -1.88
SRP54-204ENST00000553923 MRPS9P82933 396 aaKnown RBP3.33□□□□□ -1.88
SRP54-204ENST00000553923 ATP8B2P98198 1209 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 SLC10A2Q12908 348 aaPredicted RBP3.33□□□□□ -1.88
SRP54-204ENST00000553923 MTM1Q13496 603 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 SEPT2Q15019 361 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 SF3A1Q15459 793 aaKnown RBP3.33□□□□□ -1.88
SRP54-204ENST00000553923 ETFDHQ16134 617 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 TXNRD1Q16881 649 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 MUM1Q2TAK8 710 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.33□□□□□ -1.88
SRP54-204ENST00000553923 C11orf74Q86VG3 221 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 AHI1Q8N157 1196 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 SLC30A5Q8TAD4 765 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 FATE1Q969F0 183 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 RPL36ALQ969Q0 106 aaKnown RBP3.33□□□□□ -1.88
SRP54-204ENST00000553923 FBXL20Q96IG2 436 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 ACAP3Q96P50 834 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 PUS7Q96PZ0 661 aaKnown RBP3.33□□□□□ -1.88
SRP54-204ENST00000553923 UHRF1Q96T88 793 aaPredicted RBP3.33□□□□□ -1.88
SRP54-204ENST00000553923 ADGRE3Q9BY15 652 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 SENP6Q9GZR1 1112 aaPredicted RBP3.33□□□□□ -1.88
SRP54-204ENST00000553923 RBM12Q9NTZ6 932 aaKnown RBP3.33□□□□□ -1.88
SRP54-204ENST00000553923 INTS13Q9NVM9 706 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 CTTNBP2NLQ9P2B4 639 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 SERGEFQ9UGK8 458 aa3.33□□□□□ -1.88
SRP54-204ENST00000553923 PRAMEF33A0A0G2JMD5 474 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 ORC4O43929 436 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 PRAMEF10O60809 474 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 BMP15O95972 392 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 AMY1AP04745 511 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 KELP23276 732 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 CCKBRP32239 447 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 PER3P56645 1201 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 ZNF517Q6ZMY9 492 aaPredicted RBP3.32□□□□□ -1.88
SRP54-204ENST00000553923 TMPRSS9Q7Z410 1059 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 NIM1KQ8IY84 436 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 CLRN3Q8NCR9 226 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 AUTS2Q8WXX7 1259 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 PGBD1Q96JS3 809 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 ORAI2Q96SN7 254 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 DNAJC2Q99543 621 aaKnown RBP3.32□□□□□ -1.88
SRP54-204ENST00000553923 WACQ9BTA9 647 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 SEMA4CQ9C0C4 833 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 IFT122Q9HBG6 1241 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 DMRT3Q9NQL9 472 aa3.32□□□□□ -1.88
SRP54-204ENST00000553923 ZNF521Q96K83 1311 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.31□□□□□ -1.88
SRP54-204ENST00000553923 TCRBV7S2A1N4TA0A589 114 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 CDHR4A6H8M9 788 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 TEX33O43247 280 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 ALAS1P13196 640 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 SLC6A4P31645 630 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 MCAMP43121 646 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 HNRNPMP52272 730 aaKnown RBP eCLIP3.31□□□□□ -1.88
SRP54-204ENST00000553923 TUBA4AP68366 448 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 GRM1Q13255 1194 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 ATP13A4Q4VNC1 1196 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 MUM1L1Q5H9M0 696 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 DACT2Q5SW24 774 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 MORN5Q5VZ52 161 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 ZNF66Q6ZN08 573 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 NEK8Q86SG6 692 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 DHX37Q8IY37 1157 aaKnown RBP3.31□□□□□ -1.88
SRP54-204ENST00000553923 ZGPATQ8N5A5 531 aaKnown RBP3.31□□□□□ -1.88
SRP54-204ENST00000553923 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.31□□□□□ -1.88
SRP54-204ENST00000553923 MYCBPAPQ8TBZ2 947 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 LMBR1Q8WVP7 490 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 RGMAQ96B86 450 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 MRFAP1L1Q96HT8 127 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 RNPC3Q96LT9 517 aaKnown RBP3.31□□□□□ -1.88
SRP54-204ENST00000553923 TLR10Q9BXR5 811 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 BHMT2Q9H2M3 363 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 TMEM140Q9NV12 185 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 ST3GAL5Q9UNP4 418 aa3.31□□□□□ -1.88
SRP54-204ENST00000553923 KCNA2P16389 499 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 RPS7P62081 194 aaKnown RBP3.3□□□□□ -1.88
SRP54-204ENST00000553923 DYRK1AQ13627 763 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 FHL1Q13642 323 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 ANO4Q32M45 955 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 SLC44A4Q53GD3 710 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 DALRD3Q5D0E6 543 aaKnown RBP3.3□□□□□ -1.88
SRP54-204ENST00000553923 FAM180AQ6UWF9 173 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 C16orf86Q6ZW13 317 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 RASAL3Q86YV0 1011 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 CMIPQ8IY22 773 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 FAM177A1Q8N128 213 aaPredicted RBP3.3□□□□□ -1.88
SRP54-204ENST00000553923 SPATA3Q8NHX4 192 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 TBC1D15Q8TC07 691 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 TMEM125Q96AQ2 219 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 LRIG1Q96JA1 1093 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 HAPLN3Q96S86 360 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 ZNF580Q9UK33 172 aa3.3□□□□□ -1.88
SRP54-204ENST00000553923 ADGRA2Q96PE1 1338 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 GCOM1H8Y6P7 765 aaPredicted RBP3.29□□□□□ -1.88
SRP54-204ENST00000553923 NEMP1O14524 444 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 GPR32O75388 356 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 ENDOD1O94919 500 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 CHRM2P08172 466 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 SFPQP23246 707 aaKnown RBP eCLIP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms