RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 PP2D1A8MPX8 630 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 H0YCG3 227 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 XPOTO43592 962 aaKnown RBP10.81□□□□□ -0.68
ACTN1-210ENST00000553779 KRT18P05783 430 aaKnown RBP10.81□□□□□ -0.68
ACTN1-210ENST00000553779 PPP2R3AQ06190 1150 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 ADCY1Q08828 1119 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 PLD1Q13393 1074 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 SLC5A9Q2M3M2 681 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 IGSF22Q8N9C0 903 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 FAM200AQ8TCP9 573 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 C18orf25Q96B23 403 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-210ENST00000553779 ELSPBP1Q96BH3 223 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 KIF12Q96FN5 646 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 NELL2Q99435 816 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 PLIN2Q99541 437 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 OSBPL6Q9BZF3 934 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 C17orf75Q9HAS0 396 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 HEBP1Q9NRV9 189 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 CNTN3Q9P232 1028 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 ARHGAP28Q9P2N2 729 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 FBXL5Q9UKA1 691 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 FBXO4Q9UKT5 387 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 PCDHB6Q9Y5E3 794 aa10.81□□□□□ -0.68
ACTN1-210ENST00000553779 ARHGEF37A1IGU5 675 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 VWA3AA6NCI4 1184 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 SFI1A8K8P3 1242 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 MAN2B1O00754 1011 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 CLDN3O15551 220 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 TOM1L1O75674 476 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 GLULP15104 373 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 ATF2P15336 505 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 KCNE1P15382 129 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 CDC25AP30304 524 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 PRPHP41219 470 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 LIG4P49917 911 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 YWHAHQ04917 246 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-210ENST00000553779 TWF1Q12792 350 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 ZNF528Q3MIS6 628 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 SEZ6Q53EL9 994 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 TPGS2Q68CL5 300 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 TANGO2Q6ICL3 276 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 SLC8B1Q6J4K2 584 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 RINT1Q6NUQ1 792 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 DSTYKQ6XUX3 929 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 TCEAL8Q8IYN2 117 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 LEMD2Q8NC56 503 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 CSGALNACT1Q8TDX6 532 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 DNASE1L2Q92874 299 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 FAM212AQ96EL1 285 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 TBC1D32Q96NH3 1257 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 TRMT61BQ9BVS5 477 aaKnown RBP10.8□□□□□ -0.68
ACTN1-210ENST00000553779 ZHX3Q9H4I2 956 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 DLGAP2Q9P1A6 1054 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 TUBGCP4Q9UGJ1 667 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 GMEB2Q9UKD1 530 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 PCDHB8Q9UN66 801 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 MTF2Q9Y483 593 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-210ENST00000553779 PCDHGA2Q9Y5H1 932 aa10.8□□□□□ -0.68
ACTN1-210ENST00000553779 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-210ENST00000553779 OBSL1O75147 1896 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 COL4A2P08572 1712 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 K7ENM7 598 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 DPYSL4O14531 572 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 HNRNPDLO14979 420 aaKnown RBP10.79□□□□□ -0.68
ACTN1-210ENST00000553779 CXCL8P10145 99 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 PLS3P13797 630 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 IGFBP6P24592 240 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-210ENST00000553779 GUCY2CP25092 1073 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 U2AF2P26368 475 aaKnown RBP eCLIP10.79□□□□□ -0.68
ACTN1-210ENST00000553779 TARSP26639 723 aaKnown RBP10.79□□□□□ -0.68
ACTN1-210ENST00000553779 GDI1P31150 447 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 EPHB3P54753 998 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 SPAG1Q07617 926 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 DHX8Q14562 1220 aaKnown RBP10.79□□□□□ -0.68
ACTN1-210ENST00000553779 RILPL1Q5EBL4 403 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 FAM78AQ5JUQ0 283 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 DCLK2Q8N568 766 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 DDX12PQ92771 950 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 IRF7Q92985 503 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 TCEAL4Q96EI5 215 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 CALML4Q96GE6 196 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 ZBTB45Q96K62 511 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-210ENST00000553779 SUSD3Q96L08 255 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 ZMAT2Q96NC0 199 aaKnown RBP10.79□□□□□ -0.68
ACTN1-210ENST00000553779 PGLYRP2Q96PD5 576 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 GCNAQ96QF7 691 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 AVENQ9NQS1 362 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-210ENST00000553779 ZSCAN32Q9NX65 697 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 LARSQ9P2J5 1176 aaKnown RBP10.79□□□□□ -0.68
ACTN1-210ENST00000553779 AFF4Q9UHB7 1163 aaKnown RBP10.79□□□□□ -0.68
ACTN1-210ENST00000553779 USP18Q9UMW8 372 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 SMG5Q9UPR3 1016 aaKnown RBP10.79□□□□□ -0.68
ACTN1-210ENST00000553779 MYH10P35580 1976 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 ACACBO00763 2458 aa10.79□□□□□ -0.68
ACTN1-210ENST00000553779 ZNF263O14978 683 aa10.78□□□□□ -0.68
ACTN1-210ENST00000553779 TBCAO75347 108 aaKnown RBP10.78□□□□□ -0.68
ACTN1-210ENST00000553779 ABLIM3O94929 683 aa10.78□□□□□ -0.68
ACTN1-210ENST00000553779 FAM13AO94988 1023 aa10.78□□□□□ -0.68
ACTN1-210ENST00000553779 SEC24AO95486 1093 aa10.78□□□□□ -0.68
ACTN1-210ENST00000553779 SEC24BO95487 1268 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms