RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 GOLGA8IPA6NC78 632 aa25.61■■□□□ 1.69
TDP1-205ENST00000553527 GOLGA8JA6NMD2 632 aa25.61■■□□□ 1.69
TDP1-205ENST00000553527 PI4K2BG5E9Z4 385 aa25.61■■□□□ 1.69
TDP1-205ENST00000553527 GADD45BO75293 160 aaPredicted RBP25.61■■□□□ 1.69
TDP1-205ENST00000553527 PRPF40AO75400 957 aaKnown RBP25.61■■□□□ 1.69
TDP1-205ENST00000553527 NFICP08651 508 aa25.61■■□□□ 1.69
TDP1-205ENST00000553527 TMEM132DQ14C87 1099 aa25.61■■□□□ 1.69
TDP1-205ENST00000553527 CD302Q8IX05 232 aa25.61■■□□□ 1.69
TDP1-205ENST00000553527 BEST2Q8NFU1 509 aa25.61■■□□□ 1.69
TDP1-205ENST00000553527 PLEKHA4Q9H4M7 779 aa25.61■■□□□ 1.69
TDP1-205ENST00000553527 TMEM206Q9H813 350 aa25.61■■□□□ 1.69
TDP1-205ENST00000553527 DOCK6Q96HP0 2047 aa25.6■■□□□ 1.69
TDP1-205ENST00000553527 GOLGA6L22H0YM25 854 aa25.6■■□□□ 1.69
TDP1-205ENST00000553527 ADRB2P07550 413 aa25.6■■□□□ 1.69
TDP1-205ENST00000553527 CYP3A5P20815 502 aa25.6■■□□□ 1.69
TDP1-205ENST00000553527 ARPP19P56211 112 aa25.6■■□□□ 1.69
TDP1-205ENST00000553527 UBE2HP62256 183 aa25.6■■□□□ 1.69
TDP1-205ENST00000553527 FAM26FQ5R3K3 315 aa25.6■■□□□ 1.69
TDP1-205ENST00000553527 VARS2Q5ST30 1063 aaKnown RBP25.6■■□□□ 1.69
TDP1-205ENST00000553527 CRELD2Q6UXH1 353 aaPredicted RBP25.6■■□□□ 1.69
TDP1-205ENST00000553527 RSPO2Q6UXX9 243 aaPredicted RBP25.6■■□□□ 1.69
TDP1-205ENST00000553527 ANKS3Q6ZW76 656 aa25.6■■□□□ 1.69
TDP1-205ENST00000553527 UNC13DQ70J99 1090 aa25.6■■□□□ 1.69
TDP1-205ENST00000553527 CBWD1Q9BRT8 395 aa25.6■■□□□ 1.69
TDP1-205ENST00000553527 PIDD1Q9HB75 910 aa25.6■■□□□ 1.69
TDP1-205ENST00000553527 MTRRQ9UBK8 725 aa25.6■■□□□ 1.69
TDP1-205ENST00000553527 USP25Q9UHP3 1055 aa25.6■■□□□ 1.69
TDP1-205ENST00000553527 DCXO43602 365 aa25.59■■□□□ 1.69
TDP1-205ENST00000553527 ALADP13716 330 aa25.59■■□□□ 1.69
TDP1-205ENST00000553527 LRPAP1P30533 357 aa25.59■■□□□ 1.69
TDP1-205ENST00000553527 SPATA1Q5VX52 437 aa25.59■■□□□ 1.69
TDP1-205ENST00000553527 ARMCX5Q6P1M9 558 aa25.59■■□□□ 1.69
TDP1-205ENST00000553527 CNNM4Q6P4Q7 775 aa25.59■■□□□ 1.69
TDP1-205ENST00000553527 SMG7Q92540 1137 aaKnown RBP25.59■■□□□ 1.69
TDP1-205ENST00000553527 PAGE5Q96GU1 130 aa25.59■■□□□ 1.69
TDP1-205ENST00000553527 SUSD3Q96L08 255 aa25.59■■□□□ 1.69
TDP1-205ENST00000553527 NR2E1Q9Y466 385 aa25.59■■□□□ 1.69
TDP1-205ENST00000553527 FAM86C2PA6NEL3 165 aa25.58■■□□□ 1.69
TDP1-205ENST00000553527 PPEF2O14830 753 aa25.58■■□□□ 1.69
TDP1-205ENST00000553527 ACTN4O43707 911 aaKnown RBP25.58■■□□□ 1.69
TDP1-205ENST00000553527 SLFN14P0C7P3 912 aa25.58■■□□□ 1.69
TDP1-205ENST00000553527 GARTP22102 1010 aa25.58■■□□□ 1.69
TDP1-205ENST00000553527 DSTYKQ6XUX3 929 aa25.58■■□□□ 1.69
TDP1-205ENST00000553527 HDAC7Q8WUI4 952 aa25.58■■□□□ 1.69
TDP1-205ENST00000553527 TSPAN18Q96SJ8 248 aa25.58■■□□□ 1.69
TDP1-205ENST00000553527 C1QTNF1Q9BXJ1 281 aa25.58■■□□□ 1.69
TDP1-205ENST00000553527 ASB7Q9H672 318 aa25.58■■□□□ 1.69
TDP1-205ENST00000553527 SLC39A2Q9NP94 309 aa25.58■■□□□ 1.69
TDP1-205ENST00000553527 TIMM13Q9Y5L4 95 aaPredicted RBP25.58■■□□□ 1.69
TDP1-205ENST00000553527 SCN1AP35498 2009 aa25.58■■□□□ 1.68
TDP1-205ENST00000553527 C2CD4DB7Z1M9 353 aa25.57■■□□□ 1.68
TDP1-205ENST00000553527 SYN3O14994 580 aa25.57■■□□□ 1.68
TDP1-205ENST00000553527 LDHAP00338 332 aaKnown RBP25.57■■□□□ 1.68
TDP1-205ENST00000553527 FAM160A1Q05DH4 1040 aa25.57■■□□□ 1.68
TDP1-205ENST00000553527 RAB33AQ14088 237 aa25.57■■□□□ 1.68
TDP1-205ENST00000553527 LIN9Q5TKA1 542 aa25.57■■□□□ 1.68
TDP1-205ENST00000553527 C15orf39Q6ZRI6 1047 aa25.57■■□□□ 1.68
TDP1-205ENST00000553527 NELFCDQ8IXH7 590 aa25.57■■□□□ 1.68
TDP1-205ENST00000553527 BACE2Q9Y5Z0 518 aa25.57■■□□□ 1.68
TDP1-205ENST00000553527 HOXD13P35453 343 aa25.56■■□□□ 1.68
TDP1-205ENST00000553527 CTXN3Q4LDR2 81 aa25.56■■□□□ 1.68
TDP1-205ENST00000553527 PPM1LQ5SGD2 360 aa25.56■■□□□ 1.68
TDP1-205ENST00000553527 CCDC149Q6ZUS6 474 aa25.56■■□□□ 1.68
TDP1-205ENST00000553527 FMR1NBQ8N0W7 255 aaPredicted RBP25.56■■□□□ 1.68
TDP1-205ENST00000553527 APPL2Q8NEU8 664 aa25.56■■□□□ 1.68
TDP1-205ENST00000553527 CMASQ8NFW8 434 aaPredicted RBP25.56■■□□□ 1.68
TDP1-205ENST00000553527 ZNF507Q8TCN5 953 aa25.56■■□□□ 1.68
TDP1-205ENST00000553527 DPP3Q9NY33 737 aa25.56■■□□□ 1.68
TDP1-205ENST00000553527 RBAKQ9NYW8 714 aaPredicted RBP25.56■■□□□ 1.68
TDP1-205ENST00000553527 FBXW11Q9UKB1 542 aa25.56■■□□□ 1.68
TDP1-205ENST00000553527 DERAQ9Y315 318 aa25.56■■□□□ 1.68
TDP1-205ENST00000553527 DENND4AQ7Z401 1863 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 PVALEFA0A1B0GWK0 134 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 H7C4K7 107 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 ZMYND10O75800 440 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 ZNF202O95125 648 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 IL18RAPO95256 599 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 C1RP00736 705 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 C8AP07357 584 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 WNT7BP56706 349 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 C9orf57Q5W0N0 161 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 EPM2AIP1Q7L775 607 aaPredicted RBP25.55■■□□□ 1.68
TDP1-205ENST00000553527 ZNF707Q96C28 371 aaPredicted RBP25.55■■□□□ 1.68
TDP1-205ENST00000553527 PRKD2Q9BZL6 878 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 ZDHHC7Q9NXF8 308 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 PCDHB8Q9UN66 801 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 POLIQ9UNA4 740 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 C2CD2Q9Y426 696 aa25.55■■□□□ 1.68
TDP1-205ENST00000553527 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.55■■□□□ 1.68
TDP1-205ENST00000553527 EIF3DO15371 548 aaKnown RBP eCLIP25.54■■□□□ 1.68
TDP1-205ENST00000553527 EXTL3O43909 919 aa25.54■■□□□ 1.68
TDP1-205ENST00000553527 TFAMQ00059 246 aaKnown RBP25.54■■□□□ 1.68
TDP1-205ENST00000553527 KRBA2Q6ZNG9 492 aa25.54■■□□□ 1.68
TDP1-205ENST00000553527 EFCAB13Q8IY85 973 aa25.54■■□□□ 1.68
TDP1-205ENST00000553527 GPD1LQ8N335 351 aa25.54■■□□□ 1.68
TDP1-205ENST00000553527 TDRD5Q8NAT2 981 aaKnown RBP25.54■■□□□ 1.68
TDP1-205ENST00000553527 SLC7A14Q8TBB6 771 aa25.54■■□□□ 1.68
TDP1-205ENST00000553527 CCDC34Q96HJ3 373 aa25.54■■□□□ 1.68
TDP1-205ENST00000553527 FBXL5Q9UKA1 691 aa25.54■■□□□ 1.68
TDP1-205ENST00000553527 TRIOO75962 3097 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms