RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CCINQ13939 588 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 PTPAQ15257 358 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 DCAF4L1Q3SXM0 396 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 ARHGAP29Q52LW3 1261 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 CDCA2Q69YH5 1023 aaPredicted RBP16.83■□□□□ 0.28
CACNB3-220ENST00000551716 CD300LGQ6UXG3 332 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 KBTBD6Q86V97 674 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 MCPH1Q8NEM0 835 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 GDAQ9Y2T3 454 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 NRG2O14511 850 aaPredicted RBP16.82■□□□□ 0.28
CACNB3-220ENST00000551716 CPLX1O14810 134 aa16.82■□□□□ 0.28
CACNB3-220ENST00000551716 MOSPD3O75425 235 aa16.82■□□□□ 0.28
CACNB3-220ENST00000551716 SEC24AO95486 1093 aa16.82■□□□□ 0.28
CACNB3-220ENST00000551716 CPA1P15085 419 aa16.82■□□□□ 0.28
CACNB3-220ENST00000551716 RARRES1P49788 294 aa16.82■□□□□ 0.28
CACNB3-220ENST00000551716 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
CACNB3-220ENST00000551716 HS6ST3Q8IZP7 471 aa16.82■□□□□ 0.28
CACNB3-220ENST00000551716 CAMKK1Q8N5S9 505 aa16.82■□□□□ 0.28
CACNB3-220ENST00000551716 JAKMIP1Q96N16 626 aaKnown RBP16.82■□□□□ 0.28
CACNB3-220ENST00000551716 ADAM33Q9BZ11 813 aa16.82■□□□□ 0.28
CACNB3-220ENST00000551716 SLC38A7Q9NVC3 462 aa16.82■□□□□ 0.28
CACNB3-220ENST00000551716 AFF4Q9UHB7 1163 aaKnown RBP16.82■□□□□ 0.28
CACNB3-220ENST00000551716 PCDHA12Q9UN75 941 aa16.82■□□□□ 0.28
CACNB3-220ENST00000551716 SLC8A2Q9UPR5 921 aa16.82■□□□□ 0.28
CACNB3-220ENST00000551716 SDK1Q7Z5N4 2213 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 SRRM3A6NNA2 597 aaPredicted RBP16.81■□□□□ 0.28
CACNB3-220ENST00000551716 I3L4J1 428 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 DPYSL4O14531 572 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 RHOBTB1O94844 696 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 CEACAM1P13688 526 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 BRCC3P46736 316 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 PLCB2Q00722 1185 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 TWF1Q12792 350 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 FOXC1Q12948 553 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 PLD1Q13393 1074 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 MRPL58Q14197 206 aaKnown RBP16.81■□□□□ 0.28
CACNB3-220ENST00000551716 TEAD2Q15562 447 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 NPY5RQ15761 445 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 CXCL16Q9H2A7 254 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 NCOA5Q9HCD5 579 aaKnown RBP16.81■□□□□ 0.28
CACNB3-220ENST00000551716 CEP72Q9P209 647 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 TPCN1Q9ULQ1 816 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 ZZEF1O43149 2961 aa16.81■□□□□ 0.28
CACNB3-220ENST00000551716 EXTL3O43909 919 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 XBP1P17861 261 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 RPS6KB1P23443 525 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 IGFBP6P24592 240 aaPredicted RBP16.8■□□□□ 0.28
CACNB3-220ENST00000551716 PSMA5P28066 241 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 RPL9P32969 192 aaKnown RBP16.8■□□□□ 0.28
CACNB3-220ENST00000551716 SOX9P48436 509 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 YARSP54577 528 aaKnown RBP16.8■□□□□ 0.28
CACNB3-220ENST00000551716 ZNF252P-AS1Q0IIN9 211 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 PON2Q15165 354 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 ELF2Q15723 593 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 CTXN3Q4LDR2 81 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 APPL2Q8NEU8 664 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 KCNB2Q92953 911 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 EDEM2Q9BV94 578 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 TOPORSQ9NS56 1045 aaPredicted RBP16.8■□□□□ 0.28
CACNB3-220ENST00000551716 C2orf42Q9NWW7 574 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 OBP2AQ9NY56 170 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 FBXL5Q9UKA1 691 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 LHX6Q9UPM6 363 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 WASF3Q9UPY6 502 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 NUB1Q9Y5A7 615 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 IGF2RP11717 2491 aa16.8■□□□□ 0.28
CACNB3-220ENST00000551716 GREB1Q4ZG55 1949 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 SMIM28A0A1B0GU29 152 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 C4orf47A7E2U8 309 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 USO1O60763 962 aaKnown RBP16.79■□□□□ 0.28
CACNB3-220ENST00000551716 FGF19O95750 216 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 PRKCBP05771 671 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 GJA1P17302 382 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 ATP2B1P20020 1258 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 CSRP1P21291 193 aaKnown RBP16.79■□□□□ 0.28
CACNB3-220ENST00000551716 EFNA5P52803 228 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 GLRA4Q5JXX5 417 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 ZNF280DQ6N043 979 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 TXNDC11Q6PKC3 985 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 MAEAQ7L5Y9 396 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 ARID3BQ8IVW6 561 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-220ENST00000551716 C3orf58Q8NDZ4 430 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 SHKBP1Q8TBC3 707 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 PIGOQ8TEQ8 1089 aa16.79■□□□□ 0.28
CACNB3-220ENST00000551716 OXCT2Q9BYC2 517 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-220ENST00000551716 THG1LQ9NWX6 298 aaKnown RBP16.79■□□□□ 0.28
CACNB3-220ENST00000551716 TTLL13PA6NNM8 815 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 CAVIN2O95810 425 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 EPHB3P54753 998 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 AMPD2Q01433 879 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 GRSF1Q12849 480 aaKnown RBP eCLIP16.78■□□□□ 0.28
CACNB3-220ENST00000551716 PPP2R5AQ15172 486 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 PLK5Q496M5 336 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 BMP2KLQ5H9B9 411 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 WDR44Q5JSH3 913 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 SH3PXD2AQ5TCZ1 1133 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 DEPTORQ8TB45 409 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 RSPRY1Q96DX4 576 aa16.78■□□□□ 0.28
CACNB3-220ENST00000551716 TMEM209Q96SK2 561 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms